Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RHBDF1Q96CC6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.8■□□□□ 0.6
RHBDF1Q96CC6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RHBDF1Q96CC6 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.8■□□□□ 0.6
RHBDF1Q96CC6 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RHBDF1Q96CC6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RHBDF1Q96CC6 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.8■□□□□ 0.6
RHBDF1Q96CC6 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.8■□□□□ 0.6
RHBDF1Q96CC6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
RHBDF1Q96CC6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.8■□□□□ 0.6
RHBDF1Q96CC6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.8■□□□□ 0.6
RHBDF1Q96CC6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.8■□□□□ 0.6
RHBDF1Q96CC6 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RHBDF1Q96CC6 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RHBDF1Q96CC6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RHBDF1Q96CC6 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RHBDF1Q96CC6 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RHBDF1Q96CC6 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RHBDF1Q96CC6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RHBDF1Q96CC6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
RHBDF1Q96CC6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 AL161938.1-201ENST00000569833 2180 ntBASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 CD99P1-205ENST00000527459 561 ntBASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 C1QL1P1-201ENST00000568105 661 ntBASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDF1Q96CC6 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RHBDF1Q96CC6 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RHBDF1Q96CC6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
RHBDF1Q96CC6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RHBDF1Q96CC6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.78■□□□□ 0.6
RHBDF1Q96CC6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RHBDF1Q96CC6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RHBDF1Q96CC6 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.78■□□□□ 0.6
RHBDF1Q96CC6 AC239809.2-201ENST00000415381 517 ntBASIC18.78■□□□□ 0.6
RHBDF1Q96CC6 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.78■□□□□ 0.6
RHBDF1Q96CC6 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.78■□□□□ 0.6
RHBDF1Q96CC6 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
RHBDF1Q96CC6 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.78■□□□□ 0.6
RHBDF1Q96CC6 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RHBDF1Q96CC6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.78■□□□□ 0.6
RHBDF1Q96CC6 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.78■□□□□ 0.6
RHBDF1Q96CC6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RHBDF1Q96CC6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.78■□□□□ 0.6
RHBDF1Q96CC6 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.78■□□□□ 0.6
RHBDF1Q96CC6 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RHBDF1Q96CC6 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RHBDF1Q96CC6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.78■□□□□ 0.6
RHBDF1Q96CC6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
RHBDF1Q96CC6 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RHBDF1Q96CC6 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
RHBDF1Q96CC6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RHBDF1Q96CC6 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RHBDF1Q96CC6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RHBDF1Q96CC6 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RHBDF1Q96CC6 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RHBDF1Q96CC6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
RHBDF1Q96CC6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RHBDF1Q96CC6 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RHBDF1Q96CC6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.77■□□□□ 0.6
RHBDF1Q96CC6 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RHBDF1Q96CC6 KRASP1-201ENST00000407852 552 ntBASIC18.77■□□□□ 0.6
RHBDF1Q96CC6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RHBDF1Q96CC6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.77■□□□□ 0.6
RHBDF1Q96CC6 MIR4651-201ENST00000582622 73 ntBASIC18.77■□□□□ 0.6
RHBDF1Q96CC6 AC006058.3-201ENST00000606217 1069 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms