Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APH1BQ8WW43 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APH1BQ8WW43 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
APH1BQ8WW43 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APH1BQ8WW43 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.47■□□□□ 0.39
APH1BQ8WW43 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APH1BQ8WW43 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.47■□□□□ 0.39
APH1BQ8WW43 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APH1BQ8WW43 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APH1BQ8WW43 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APH1BQ8WW43 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
APH1BQ8WW43 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
APH1BQ8WW43 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APH1BQ8WW43 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APH1BQ8WW43 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
APH1BQ8WW43 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.39
APH1BQ8WW43 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
APH1BQ8WW43 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
APH1BQ8WW43 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.46■□□□□ 0.39
APH1BQ8WW43 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
APH1BQ8WW43 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.46■□□□□ 0.39
APH1BQ8WW43 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.46■□□□□ 0.39
APH1BQ8WW43 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
APH1BQ8WW43 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
APH1BQ8WW43 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
APH1BQ8WW43 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
APH1BQ8WW43 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
APH1BQ8WW43 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
APH1BQ8WW43 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
APH1BQ8WW43 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.46■□□□□ 0.39
APH1BQ8WW43 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.46■□□□□ 0.39
APH1BQ8WW43 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.46■□□□□ 0.39
APH1BQ8WW43 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.46■□□□□ 0.39
APH1BQ8WW43 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
APH1BQ8WW43 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.38
APH1BQ8WW43 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
APH1BQ8WW43 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.45■□□□□ 0.38
APH1BQ8WW43 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.45■□□□□ 0.38
APH1BQ8WW43 ANO7L1-203ENST00000602586 1720 ntBASIC17.45■□□□□ 0.38
APH1BQ8WW43 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.45■□□□□ 0.38
APH1BQ8WW43 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
APH1BQ8WW43 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
APH1BQ8WW43 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.45■□□□□ 0.38
APH1BQ8WW43 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
APH1BQ8WW43 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.45■□□□□ 0.38
APH1BQ8WW43 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.45■□□□□ 0.38
APH1BQ8WW43 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.45■□□□□ 0.38
APH1BQ8WW43 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.45■□□□□ 0.38
APH1BQ8WW43 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.45■□□□□ 0.38
APH1BQ8WW43 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
APH1BQ8WW43 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.45■□□□□ 0.38
APH1BQ8WW43 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
APH1BQ8WW43 AC104417.2-201ENST00000562989 1793 ntBASIC17.45■□□□□ 0.38
APH1BQ8WW43 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
APH1BQ8WW43 ABALON-201ENST00000629058 1903 ntBASIC17.45■□□□□ 0.38
APH1BQ8WW43 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
APH1BQ8WW43 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
APH1BQ8WW43 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.45■□□□□ 0.38
APH1BQ8WW43 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.45■□□□□ 0.38
APH1BQ8WW43 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
APH1BQ8WW43 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.44■□□□□ 0.38
APH1BQ8WW43 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.44■□□□□ 0.38
APH1BQ8WW43 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
APH1BQ8WW43 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
APH1BQ8WW43 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
APH1BQ8WW43 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
APH1BQ8WW43 FZD10-202ENST00000539839 3282 ntBASIC17.44■□□□□ 0.38
APH1BQ8WW43 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
APH1BQ8WW43 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
APH1BQ8WW43 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
APH1BQ8WW43 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
APH1BQ8WW43 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.44■□□□□ 0.38
APH1BQ8WW43 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.44■□□□□ 0.38
APH1BQ8WW43 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.44■□□□□ 0.38
APH1BQ8WW43 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.44■□□□□ 0.38
APH1BQ8WW43 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
APH1BQ8WW43 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.44■□□□□ 0.38
APH1BQ8WW43 AC013268.1-206ENST00000638368 961 ntBASIC17.44■□□□□ 0.38
APH1BQ8WW43 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.44■□□□□ 0.38
APH1BQ8WW43 AC112229.1-201ENST00000639295 961 ntBASIC17.44■□□□□ 0.38
APH1BQ8WW43 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
APH1BQ8WW43 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
APH1BQ8WW43 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
APH1BQ8WW43 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
APH1BQ8WW43 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
APH1BQ8WW43 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
APH1BQ8WW43 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
APH1BQ8WW43 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
APH1BQ8WW43 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
APH1BQ8WW43 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
APH1BQ8WW43 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
APH1BQ8WW43 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
APH1BQ8WW43 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
APH1BQ8WW43 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
APH1BQ8WW43 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
APH1BQ8WW43 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
APH1BQ8WW43 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.43■□□□□ 0.38
APH1BQ8WW43 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
APH1BQ8WW43 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
APH1BQ8WW43 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms