Protein–RNA interactions for Protein: Q8NI51

CTCFL, Transcriptional repressor CTCFL, humanhuman

Predicted RBP Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFLQ8NI51 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CTCFLQ8NI51 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
CTCFLQ8NI51 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC22.52■■□□□ 1.19
CTCFLQ8NI51 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
CTCFLQ8NI51 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CTCFLQ8NI51 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC22.51■■□□□ 1.19
CTCFLQ8NI51 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
CTCFLQ8NI51 TP73-202ENST00000354437 2140 ntTSL 5 BASIC22.51■■□□□ 1.19
CTCFLQ8NI51 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CTCFLQ8NI51 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC22.51■■□□□ 1.19
CTCFLQ8NI51 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC22.51■■□□□ 1.19
CTCFLQ8NI51 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
CTCFLQ8NI51 TSPY7P-201ENST00000431358 1114 ntBASIC22.51■■□□□ 1.19
CTCFLQ8NI51 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC22.51■■□□□ 1.19
CTCFLQ8NI51 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC22.51■■□□□ 1.19
CTCFLQ8NI51 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC22.51■■□□□ 1.19
CTCFLQ8NI51 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
CTCFLQ8NI51 AC026271.3-201ENST00000571884 352 ntBASIC22.51■■□□□ 1.19
CTCFLQ8NI51 MIR4497-201ENST00000583208 89 ntBASIC22.51■■□□□ 1.19
CTCFLQ8NI51 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC22.51■■□□□ 1.19
CTCFLQ8NI51 ABBA01031674.1-201ENST00000635145 728 ntBASIC22.51■■□□□ 1.19
CTCFLQ8NI51 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CTCFLQ8NI51 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CTCFLQ8NI51 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CTCFLQ8NI51 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CTCFLQ8NI51 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CTCFLQ8NI51 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CTCFLQ8NI51 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
CTCFLQ8NI51 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CTCFLQ8NI51 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CTCFLQ8NI51 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CTCFLQ8NI51 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CTCFLQ8NI51 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CTCFLQ8NI51 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC22.5■■□□□ 1.19
CTCFLQ8NI51 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CTCFLQ8NI51 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CTCFLQ8NI51 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
CTCFLQ8NI51 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CTCFLQ8NI51 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
CTCFLQ8NI51 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
CTCFLQ8NI51 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CTCFLQ8NI51 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CTCFLQ8NI51 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CTCFLQ8NI51 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC22.5■■□□□ 1.19
CTCFLQ8NI51 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
CTCFLQ8NI51 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CTCFLQ8NI51 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CTCFLQ8NI51 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
CTCFLQ8NI51 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC22.49■■□□□ 1.19
CTCFLQ8NI51 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC22.49■■□□□ 1.19
CTCFLQ8NI51 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CTCFLQ8NI51 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
CTCFLQ8NI51 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CTCFLQ8NI51 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CTCFLQ8NI51 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CTCFLQ8NI51 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
CTCFLQ8NI51 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC22.49■■□□□ 1.19
CTCFLQ8NI51 PTPA-216ENST00000432651 857 ntTSL 2 BASIC22.49■■□□□ 1.19
CTCFLQ8NI51 AL355355.2-201ENST00000442321 338 ntBASIC22.49■■□□□ 1.19
CTCFLQ8NI51 NUDT16P1-203ENST00000513809 620 ntBASIC22.49■■□□□ 1.19
CTCFLQ8NI51 DHDH-203ENST00000522614 776 ntTSL 5 BASIC22.49■■□□□ 1.19
CTCFLQ8NI51 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC22.49■■□□□ 1.19
CTCFLQ8NI51 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC22.49■■□□□ 1.19
CTCFLQ8NI51 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC22.49■■□□□ 1.19
CTCFLQ8NI51 MIR4785-201ENST00000585005 73 ntBASIC22.49■■□□□ 1.19
CTCFLQ8NI51 AC026471.5-201ENST00000615068 467 ntBASIC22.49■■□□□ 1.19
CTCFLQ8NI51 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CTCFLQ8NI51 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC22.49■■□□□ 1.19
CTCFLQ8NI51 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC22.49■■□□□ 1.19
CTCFLQ8NI51 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CTCFLQ8NI51 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
CTCFLQ8NI51 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CTCFLQ8NI51 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CTCFLQ8NI51 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC22.48■■□□□ 1.19
CTCFLQ8NI51 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CTCFLQ8NI51 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC22.48■■□□□ 1.19
CTCFLQ8NI51 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CTCFLQ8NI51 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
CTCFLQ8NI51 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CTCFLQ8NI51 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC22.48■■□□□ 1.19
CTCFLQ8NI51 Z82202.1-201ENST00000623446 1880 ntBASIC22.48■■□□□ 1.19
CTCFLQ8NI51 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC22.48■■□□□ 1.19
CTCFLQ8NI51 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC22.48■■□□□ 1.19
CTCFLQ8NI51 Z85996.1-201ENST00000494644 937 ntBASIC22.48■■□□□ 1.19
CTCFLQ8NI51 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CTCFLQ8NI51 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC22.48■■□□□ 1.19
CTCFLQ8NI51 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC22.48■■□□□ 1.19
CTCFLQ8NI51 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC22.48■■□□□ 1.19
CTCFLQ8NI51 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC22.48■■□□□ 1.19
CTCFLQ8NI51 DECR2-212ENST00000627716 352 ntTSL 2 BASIC22.48■■□□□ 1.19
CTCFLQ8NI51 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
CTCFLQ8NI51 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC22.48■■□□□ 1.19
CTCFLQ8NI51 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CTCFLQ8NI51 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
CTCFLQ8NI51 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CTCFLQ8NI51 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CTCFLQ8NI51 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CTCFLQ8NI51 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CTCFLQ8NI51 SDHAP1-207ENST00000440850 2000 ntBASIC22.47■■□□□ 1.19
CTCFLQ8NI51 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms