Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NUP43Q8NFH3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.07■□□□□ 0.48
NUP43Q8NFH3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NUP43Q8NFH3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NUP43Q8NFH3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
NUP43Q8NFH3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.07■□□□□ 0.48
NUP43Q8NFH3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NUP43Q8NFH3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.06■□□□□ 0.48
NUP43Q8NFH3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NUP43Q8NFH3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NUP43Q8NFH3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NUP43Q8NFH3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
NUP43Q8NFH3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NUP43Q8NFH3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.06■□□□□ 0.48
NUP43Q8NFH3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.06■□□□□ 0.48
NUP43Q8NFH3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NUP43Q8NFH3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NUP43Q8NFH3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NUP43Q8NFH3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.06■□□□□ 0.48
NUP43Q8NFH3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NUP43Q8NFH3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NUP43Q8NFH3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NUP43Q8NFH3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.06■□□□□ 0.48
NUP43Q8NFH3 KRASP1-201ENST00000407852 552 ntBASIC18.06■□□□□ 0.48
NUP43Q8NFH3 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
NUP43Q8NFH3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NUP43Q8NFH3 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NUP43Q8NFH3 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.06■□□□□ 0.48
NUP43Q8NFH3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.06■□□□□ 0.48
NUP43Q8NFH3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.06■□□□□ 0.48
NUP43Q8NFH3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NUP43Q8NFH3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NUP43Q8NFH3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NUP43Q8NFH3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NUP43Q8NFH3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.06■□□□□ 0.48
NUP43Q8NFH3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NUP43Q8NFH3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NUP43Q8NFH3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NUP43Q8NFH3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NUP43Q8NFH3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.05■□□□□ 0.48
NUP43Q8NFH3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NUP43Q8NFH3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NUP43Q8NFH3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NUP43Q8NFH3 AC141586.3-201ENST00000562166 1838 ntBASIC18.05■□□□□ 0.48
NUP43Q8NFH3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NUP43Q8NFH3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.05■□□□□ 0.48
NUP43Q8NFH3 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
NUP43Q8NFH3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NUP43Q8NFH3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.05■□□□□ 0.48
NUP43Q8NFH3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NUP43Q8NFH3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NUP43Q8NFH3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NUP43Q8NFH3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.05■□□□□ 0.48
NUP43Q8NFH3 AC239809.2-201ENST00000415381 517 ntBASIC18.05■□□□□ 0.48
NUP43Q8NFH3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.05■□□□□ 0.48
NUP43Q8NFH3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.05■□□□□ 0.48
NUP43Q8NFH3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
NUP43Q8NFH3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
NUP43Q8NFH3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.05■□□□□ 0.48
NUP43Q8NFH3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.05■□□□□ 0.48
NUP43Q8NFH3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.05■□□□□ 0.48
NUP43Q8NFH3 AC006058.3-201ENST00000606217 1069 ntBASIC18.05■□□□□ 0.48
NUP43Q8NFH3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.05■□□□□ 0.48
NUP43Q8NFH3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NUP43Q8NFH3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NUP43Q8NFH3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.05■□□□□ 0.48
NUP43Q8NFH3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
NUP43Q8NFH3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
NUP43Q8NFH3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NUP43Q8NFH3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
NUP43Q8NFH3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NUP43Q8NFH3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.04■□□□□ 0.48
NUP43Q8NFH3 LINC01465-201ENST00000408887 1940 ntBASIC18.04■□□□□ 0.48
NUP43Q8NFH3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
NUP43Q8NFH3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NUP43Q8NFH3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NUP43Q8NFH3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NUP43Q8NFH3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
NUP43Q8NFH3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.04■□□□□ 0.48
NUP43Q8NFH3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NUP43Q8NFH3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.04■□□□□ 0.48
NUP43Q8NFH3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NUP43Q8NFH3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
NUP43Q8NFH3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
NUP43Q8NFH3 AC073648.6-201ENST00000641589 218 ntBASIC18.04■□□□□ 0.48
NUP43Q8NFH3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NUP43Q8NFH3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NUP43Q8NFH3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NUP43Q8NFH3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NUP43Q8NFH3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NUP43Q8NFH3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NUP43Q8NFH3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NUP43Q8NFH3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NUP43Q8NFH3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NUP43Q8NFH3 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
NUP43Q8NFH3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.03■□□□□ 0.48
NUP43Q8NFH3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.03■□□□□ 0.48
NUP43Q8NFH3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NUP43Q8NFH3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NUP43Q8NFH3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms