Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RTL3Q8N8U3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.82■□□□□ 0.76
RTL3Q8N8U3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.82■□□□□ 0.76
RTL3Q8N8U3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.82■□□□□ 0.76
RTL3Q8N8U3 AC007952.6-201ENST00000573168 2673 ntBASIC19.82■□□□□ 0.76
RTL3Q8N8U3 AC003957.1-201ENST00000625108 2673 ntBASIC19.82■□□□□ 0.76
RTL3Q8N8U3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.82■□□□□ 0.76
RTL3Q8N8U3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RTL3Q8N8U3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RTL3Q8N8U3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RTL3Q8N8U3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTL3Q8N8U3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.82■□□□□ 0.76
RTL3Q8N8U3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RTL3Q8N8U3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTL3Q8N8U3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTL3Q8N8U3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTL3Q8N8U3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
RTL3Q8N8U3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTL3Q8N8U3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.82■□□□□ 0.76
RTL3Q8N8U3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.82■□□□□ 0.76
RTL3Q8N8U3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.82■□□□□ 0.76
RTL3Q8N8U3 AL031985.4-201ENST00000642138 673 ntBASIC19.82■□□□□ 0.76
RTL3Q8N8U3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTL3Q8N8U3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTL3Q8N8U3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTL3Q8N8U3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.82■□□□□ 0.76
RTL3Q8N8U3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTL3Q8N8U3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTL3Q8N8U3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTL3Q8N8U3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.82■□□□□ 0.76
RTL3Q8N8U3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.81■□□□□ 0.76
RTL3Q8N8U3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RTL3Q8N8U3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
RTL3Q8N8U3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.81■□□□□ 0.76
RTL3Q8N8U3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTL3Q8N8U3 AC116562.4-201ENST00000641316 2276 ntBASIC19.81■□□□□ 0.76
RTL3Q8N8U3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTL3Q8N8U3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
RTL3Q8N8U3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTL3Q8N8U3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTL3Q8N8U3 AC093827.2-201ENST00000512654 315 ntBASIC19.81■□□□□ 0.76
RTL3Q8N8U3 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.81■□□□□ 0.76
RTL3Q8N8U3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.81■□□□□ 0.76
RTL3Q8N8U3 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.81■□□□□ 0.76
RTL3Q8N8U3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RTL3Q8N8U3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTL3Q8N8U3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTL3Q8N8U3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.81■□□□□ 0.76
RTL3Q8N8U3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.81■□□□□ 0.76
RTL3Q8N8U3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.81■□□□□ 0.76
RTL3Q8N8U3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.81■□□□□ 0.76
RTL3Q8N8U3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RTL3Q8N8U3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RTL3Q8N8U3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTL3Q8N8U3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTL3Q8N8U3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.8■□□□□ 0.76
RTL3Q8N8U3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
RTL3Q8N8U3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTL3Q8N8U3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTL3Q8N8U3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTL3Q8N8U3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RTL3Q8N8U3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
RTL3Q8N8U3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
RTL3Q8N8U3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTL3Q8N8U3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.8■□□□□ 0.76
RTL3Q8N8U3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.8■□□□□ 0.76
RTL3Q8N8U3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.8■□□□□ 0.76
RTL3Q8N8U3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTL3Q8N8U3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTL3Q8N8U3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTL3Q8N8U3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTL3Q8N8U3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RTL3Q8N8U3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.8■□□□□ 0.76
RTL3Q8N8U3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.8■□□□□ 0.76
RTL3Q8N8U3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.8■□□□□ 0.76
RTL3Q8N8U3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.79■□□□□ 0.76
RTL3Q8N8U3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
RTL3Q8N8U3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RTL3Q8N8U3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
RTL3Q8N8U3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTL3Q8N8U3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RTL3Q8N8U3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.79■□□□□ 0.76
RTL3Q8N8U3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTL3Q8N8U3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.79■□□□□ 0.76
RTL3Q8N8U3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.79■□□□□ 0.76
RTL3Q8N8U3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.79■□□□□ 0.76
RTL3Q8N8U3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RTL3Q8N8U3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.79■□□□□ 0.76
RTL3Q8N8U3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.79■□□□□ 0.76
RTL3Q8N8U3 KRT8P41-201ENST00000533985 1514 ntBASIC19.79■□□□□ 0.76
RTL3Q8N8U3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RTL3Q8N8U3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTL3Q8N8U3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTL3Q8N8U3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTL3Q8N8U3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.79■□□□□ 0.76
RTL3Q8N8U3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RTL3Q8N8U3 AL032819.2-201ENST00000624543 2162 ntBASIC19.78■□□□□ 0.76
RTL3Q8N8U3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RTL3Q8N8U3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.78■□□□□ 0.76
RTL3Q8N8U3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms