Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC33Q8N5R6 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC33Q8N5R6 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
CCDC33Q8N5R6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC33Q8N5R6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC33Q8N5R6 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC33Q8N5R6 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC33Q8N5R6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CCDC33Q8N5R6 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC33Q8N5R6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CCDC33Q8N5R6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CCDC33Q8N5R6 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC33Q8N5R6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC33Q8N5R6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC33Q8N5R6 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.25■□□□□ 0.83
CCDC33Q8N5R6 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CCDC33Q8N5R6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC33Q8N5R6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC33Q8N5R6 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CCDC33Q8N5R6 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC33Q8N5R6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC33Q8N5R6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
CCDC33Q8N5R6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CCDC33Q8N5R6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC33Q8N5R6 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC33Q8N5R6 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC33Q8N5R6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC33Q8N5R6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC33Q8N5R6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CCDC33Q8N5R6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CCDC33Q8N5R6 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CCDC33Q8N5R6 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CCDC33Q8N5R6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC33Q8N5R6 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC33Q8N5R6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
CCDC33Q8N5R6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CCDC33Q8N5R6 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC33Q8N5R6 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC33Q8N5R6 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC33Q8N5R6 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC33Q8N5R6 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC33Q8N5R6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC33Q8N5R6 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
CCDC33Q8N5R6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC33Q8N5R6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC33Q8N5R6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
CCDC33Q8N5R6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC33Q8N5R6 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC33Q8N5R6 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC33Q8N5R6 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC33Q8N5R6 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC33Q8N5R6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CCDC33Q8N5R6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC33Q8N5R6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
CCDC33Q8N5R6 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC33Q8N5R6 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC33Q8N5R6 TFP1-202ENST00000475455 1573 ntBASIC20.22■□□□□ 0.83
CCDC33Q8N5R6 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CCDC33Q8N5R6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC33Q8N5R6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC33Q8N5R6 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC33Q8N5R6 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCDC33Q8N5R6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC33Q8N5R6 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCDC33Q8N5R6 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CCDC33Q8N5R6 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC33Q8N5R6 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
CCDC33Q8N5R6 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CCDC33Q8N5R6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC33Q8N5R6 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC33Q8N5R6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC33Q8N5R6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CCDC33Q8N5R6 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC33Q8N5R6 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC33Q8N5R6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC33Q8N5R6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC33Q8N5R6 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC33Q8N5R6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC33Q8N5R6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC33Q8N5R6 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.21■□□□□ 0.83
CCDC33Q8N5R6 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CCDC33Q8N5R6 RBM17P1-201ENST00000453646 1190 ntBASIC20.21■□□□□ 0.83
CCDC33Q8N5R6 NUDT16P1-203ENST00000513809 620 ntBASIC20.21■□□□□ 0.83
CCDC33Q8N5R6 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC33Q8N5R6 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CCDC33Q8N5R6 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC33Q8N5R6 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC33Q8N5R6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC33Q8N5R6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CCDC33Q8N5R6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC33Q8N5R6 KRT8P9-201ENST00000558927 1449 ntBASIC20.2■□□□□ 0.82
CCDC33Q8N5R6 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC33Q8N5R6 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC33Q8N5R6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC33Q8N5R6 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.2■□□□□ 0.82
CCDC33Q8N5R6 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC33Q8N5R6 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC33Q8N5R6 AC093484.2-201ENST00000580996 2166 ntBASIC20.2■□□□□ 0.82
CCDC33Q8N5R6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC33Q8N5R6 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms