Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEFF1Q8IYR6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TMEFF1Q8IYR6 AC092667.1-201ENST00000434301 2586 ntBASIC19.19■□□□□ 0.66
TMEFF1Q8IYR6 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEFF1Q8IYR6 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.19■□□□□ 0.66
TMEFF1Q8IYR6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TMEFF1Q8IYR6 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.19■□□□□ 0.66
TMEFF1Q8IYR6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TMEFF1Q8IYR6 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.19■□□□□ 0.66
TMEFF1Q8IYR6 VENTXP5-201ENST00000523979 775 ntBASIC19.19■□□□□ 0.66
TMEFF1Q8IYR6 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TMEFF1Q8IYR6 AC008622.2-201ENST00000617006 1229 ntBASIC19.19■□□□□ 0.66
TMEFF1Q8IYR6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.19■□□□□ 0.66
TMEFF1Q8IYR6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.19■□□□□ 0.66
TMEFF1Q8IYR6 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEFF1Q8IYR6 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TMEFF1Q8IYR6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TMEFF1Q8IYR6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TMEFF1Q8IYR6 KRT8P41-201ENST00000533985 1514 ntBASIC19.19■□□□□ 0.66
TMEFF1Q8IYR6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEFF1Q8IYR6 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEFF1Q8IYR6 AC073314.1-201ENST00000568729 2216 ntBASIC19.19■□□□□ 0.66
TMEFF1Q8IYR6 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TMEFF1Q8IYR6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TMEFF1Q8IYR6 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEFF1Q8IYR6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.18■□□□□ 0.66
TMEFF1Q8IYR6 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.18■□□□□ 0.66
TMEFF1Q8IYR6 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEFF1Q8IYR6 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEFF1Q8IYR6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TMEFF1Q8IYR6 AL450487.1-201ENST00000426799 995 ntBASIC19.18■□□□□ 0.66
TMEFF1Q8IYR6 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.18■□□□□ 0.66
TMEFF1Q8IYR6 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.18■□□□□ 0.66
TMEFF1Q8IYR6 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.18■□□□□ 0.66
TMEFF1Q8IYR6 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TMEFF1Q8IYR6 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.18■□□□□ 0.66
TMEFF1Q8IYR6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.18■□□□□ 0.66
TMEFF1Q8IYR6 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEFF1Q8IYR6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.18■□□□□ 0.66
TMEFF1Q8IYR6 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TMEFF1Q8IYR6 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.18■□□□□ 0.66
TMEFF1Q8IYR6 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TMEFF1Q8IYR6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
TMEFF1Q8IYR6 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TMEFF1Q8IYR6 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.18■□□□□ 0.66
TMEFF1Q8IYR6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEFF1Q8IYR6 AP001271.2-201ENST00000624018 1556 ntBASIC19.18■□□□□ 0.66
TMEFF1Q8IYR6 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEFF1Q8IYR6 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEFF1Q8IYR6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEFF1Q8IYR6 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEFF1Q8IYR6 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.17■□□□□ 0.66
TMEFF1Q8IYR6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.17■□□□□ 0.66
TMEFF1Q8IYR6 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMEFF1Q8IYR6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.17■□□□□ 0.66
TMEFF1Q8IYR6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMEFF1Q8IYR6 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMEFF1Q8IYR6 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.17■□□□□ 0.66
TMEFF1Q8IYR6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.17■□□□□ 0.66
TMEFF1Q8IYR6 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEFF1Q8IYR6 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMEFF1Q8IYR6 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.17■□□□□ 0.66
TMEFF1Q8IYR6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.17■□□□□ 0.66
TMEFF1Q8IYR6 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.17■□□□□ 0.66
TMEFF1Q8IYR6 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.17■□□□□ 0.66
TMEFF1Q8IYR6 CLEC4GP1-201ENST00000596555 870 ntBASIC19.17■□□□□ 0.66
TMEFF1Q8IYR6 AC069148.1-201ENST00000608741 768 ntBASIC19.17■□□□□ 0.66
TMEFF1Q8IYR6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEFF1Q8IYR6 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEFF1Q8IYR6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEFF1Q8IYR6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.17■□□□□ 0.66
TMEFF1Q8IYR6 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.17■□□□□ 0.66
TMEFF1Q8IYR6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMEFF1Q8IYR6 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TMEFF1Q8IYR6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMEFF1Q8IYR6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMEFF1Q8IYR6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.17■□□□□ 0.66
TMEFF1Q8IYR6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TMEFF1Q8IYR6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TMEFF1Q8IYR6 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEFF1Q8IYR6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEFF1Q8IYR6 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TMEFF1Q8IYR6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TMEFF1Q8IYR6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.16■□□□□ 0.66
TMEFF1Q8IYR6 AC026396.1-201ENST00000419388 421 ntBASIC19.16■□□□□ 0.66
TMEFF1Q8IYR6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.16■□□□□ 0.66
TMEFF1Q8IYR6 AC112907.2-201ENST00000448639 330 ntBASIC19.16■□□□□ 0.66
TMEFF1Q8IYR6 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.16■□□□□ 0.66
TMEFF1Q8IYR6 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.16■□□□□ 0.66
TMEFF1Q8IYR6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.16■□□□□ 0.66
TMEFF1Q8IYR6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
TMEFF1Q8IYR6 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEFF1Q8IYR6 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEFF1Q8IYR6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TMEFF1Q8IYR6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.16■□□□□ 0.66
TMEFF1Q8IYR6 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEFF1Q8IYR6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TMEFF1Q8IYR6 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.16■□□□□ 0.66
TMEFF1Q8IYR6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.16■□□□□ 0.66
TMEFF1Q8IYR6 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms