Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTTNQ86VV8 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RTTNQ86VV8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTTNQ86VV8 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RTTNQ86VV8 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RTTNQ86VV8 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RTTNQ86VV8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.03■□□□□ 0.32
RTTNQ86VV8 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RTTNQ86VV8 HLA-G-202ENST00000376815 851 ntBASIC17.02■□□□□ 0.32
RTTNQ86VV8 HLA-G-203ENST00000376818 1127 ntBASIC17.02■□□□□ 0.32
RTTNQ86VV8 AC239809.2-201ENST00000415381 517 ntBASIC17.02■□□□□ 0.32
RTTNQ86VV8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
RTTNQ86VV8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.02■□□□□ 0.32
RTTNQ86VV8 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTTNQ86VV8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.02■□□□□ 0.32
RTTNQ86VV8 AC124016.1-201ENST00000609552 612 ntBASIC17.02■□□□□ 0.32
RTTNQ86VV8 AL353708.3-201ENST00000610272 989 ntBASIC17.02■□□□□ 0.32
RTTNQ86VV8 HTR7P1-202ENST00000624664 4411 ntBASIC17.02■□□□□ 0.32
RTTNQ86VV8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTTNQ86VV8 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RTTNQ86VV8 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RTTNQ86VV8 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
RTTNQ86VV8 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.02■□□□□ 0.32
RTTNQ86VV8 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.02■□□□□ 0.32
RTTNQ86VV8 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTTNQ86VV8 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTTNQ86VV8 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTTNQ86VV8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RTTNQ86VV8 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RTTNQ86VV8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RTTNQ86VV8 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RTTNQ86VV8 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.02■□□□□ 0.32
RTTNQ86VV8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RTTNQ86VV8 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.02■□□□□ 0.32
RTTNQ86VV8 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.02■□□□□ 0.32
RTTNQ86VV8 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
RTTNQ86VV8 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.02■□□□□ 0.32
RTTNQ86VV8 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RTTNQ86VV8 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RTTNQ86VV8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RTTNQ86VV8 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RTTNQ86VV8 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
RTTNQ86VV8 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
RTTNQ86VV8 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RTTNQ86VV8 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTTNQ86VV8 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RTTNQ86VV8 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RTTNQ86VV8 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RTTNQ86VV8 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTTNQ86VV8 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RTTNQ86VV8 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTTNQ86VV8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTTNQ86VV8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.01■□□□□ 0.31
RTTNQ86VV8 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RTTNQ86VV8 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RTTNQ86VV8 RNF165-205ENST00000588679 2904 ntBASIC17.01■□□□□ 0.31
RTTNQ86VV8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RTTNQ86VV8 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RTTNQ86VV8 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTTNQ86VV8 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.01■□□□□ 0.31
RTTNQ86VV8 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RTTNQ86VV8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTTNQ86VV8 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTTNQ86VV8 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTTNQ86VV8 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RTTNQ86VV8 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RTTNQ86VV8 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.01■□□□□ 0.31
RTTNQ86VV8 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
RTTNQ86VV8 YBX1P10-201ENST00000444752 975 ntBASIC17.01■□□□□ 0.31
RTTNQ86VV8 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RTTNQ86VV8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTTNQ86VV8 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17■□□□□ 0.31
RTTNQ86VV8 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17■□□□□ 0.31
RTTNQ86VV8 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17■□□□□ 0.31
RTTNQ86VV8 AC005332.7-201ENST00000614046 2005 ntBASIC17■□□□□ 0.31
RTTNQ86VV8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTTNQ86VV8 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17■□□□□ 0.31
RTTNQ86VV8 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17■□□□□ 0.31
RTTNQ86VV8 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17■□□□□ 0.31
RTTNQ86VV8 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17■□□□□ 0.31
RTTNQ86VV8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17■□□□□ 0.31
RTTNQ86VV8 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RTTNQ86VV8 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RTTNQ86VV8 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17■□□□□ 0.31
RTTNQ86VV8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17■□□□□ 0.31
RTTNQ86VV8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
RTTNQ86VV8 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17■□□□□ 0.31
RTTNQ86VV8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17■□□□□ 0.31
RTTNQ86VV8 AC087499.1-201ENST00000418141 1075 ntBASIC17■□□□□ 0.31
RTTNQ86VV8 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
RTTNQ86VV8 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
RTTNQ86VV8 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RTTNQ86VV8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RTTNQ86VV8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTTNQ86VV8 KRT17P2-201ENST00000300992 1314 ntBASIC16.99■□□□□ 0.31
RTTNQ86VV8 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTTNQ86VV8 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTTNQ86VV8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTTNQ86VV8 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RTTNQ86VV8 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms