Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 SLC52A2-204ENST00000526338 655 ntTSL 316.77■□□□□ 0.282e-8■■□□□ 13.3
SND1Q7KZF4 SLC26A6-206ENST00000414944 724 ntTSL 318.12■□□□□ 0.492e-7■■□□□ 13.3
SND1Q7KZF4 SLC26A6-212ENST00000444531 806 ntTSL 316.21■□□□□ 0.192e-7■■□□□ 13.3
SND1Q7KZF4 SLC26A6-208ENST00000421649 910 ntTSL 315.58■□□□□ 0.082e-7■■□□□ 13.3
SND1Q7KZF4 SLC26A6-218ENST00000482282 1029 ntTSL 514.45□□□□□ -0.12e-7■■□□□ 13.3
SND1Q7KZF4 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.318e-9■■□□□ 13.3
SND1Q7KZF4 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.228e-9■■□□□ 13.3
SND1Q7KZF4 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC14.01□□□□□ -0.178e-9■■□□□ 13.3
SND1Q7KZF4 SCARB1-207ENST00000541661 476 ntTSL 513.56□□□□□ -0.243e-10■■□□□ 13.3
SND1Q7KZF4 KDM3A-205ENST00000441719 8741 ntTSL 211.81□□□□□ -0.528e-9■■□□□ 13.3
SND1Q7KZF4 KDM3A-202ENST00000409064 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.648e-9■■□□□ 13.3
SND1Q7KZF4 KDM3A-210ENST00000470160 2955 ntTSL 27.35□□□□□ -1.238e-9■■□□□ 13.3
SND1Q7KZF4 KDM3A-214ENST00000491383 4485 ntTSL 1 (best)5.84□□□□□ -1.478e-9■■□□□ 13.3
SND1Q7KZF4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.53■□□□□ 0.887e-8■■□□□ 13.3
SND1Q7KZF4 ANXA2-203ENST00000421017 1444 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.817e-8■■□□□ 13.3
SND1Q7KZF4 ANXA2-205ENST00000504475 3528 ntTSL 29.55□□□□□ -0.887e-8■■□□□ 13.3
SND1Q7KZF4 ANXA2-204ENST00000451270 1435 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.957e-8■■□□□ 13.3
SND1Q7KZF4 ANXA2-202ENST00000396024 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.027e-8■■□□□ 13.3
SND1Q7KZF4 ANXA2-228ENST00000560014 2339 ntTSL 28.57□□□□□ -1.047e-8■■□□□ 13.3
SND1Q7KZF4 A2M-203ENST00000462568 546 ntTSL 23.93□□□□□ -1.781e-323■■□□□ 13.3
SND1Q7KZF4 DGAT1-205ENST00000527885 605 ntTSL 314.53□□□□□ -0.082e-8■■□□□ 13.3
SND1Q7KZF4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.942e-8■■□□□ 13.3
SND1Q7KZF4 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.66■□□□□ 0.742e-8■■□□□ 13.3
SND1Q7KZF4 AGRN-202ENST00000419249 861 ntTSL 319.02■□□□□ 0.643e-10■■□□□ 13.3
SND1Q7KZF4 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.178e-8■■□□□ 13.3
SND1Q7KZF4 SORL1-210ENST00000532451 2165 ntTSL 1 (best)25.66■■□□□ 1.72e-7■■□□□ 13.3
SND1Q7KZF4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC25.04■■□□□ 1.62e-6■■□□□ 13.3
SND1Q7KZF4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.32■■□□□ 1.322e-6■■□□□ 13.3
SND1Q7KZF4 PRMT1-213ENST00000529650 479 ntTSL 222.76■■□□□ 1.231e-11■■□□□ 13.3
SND1Q7KZF4 PRMT1-204ENST00000525616 780 ntTSL 222.56■■□□□ 1.21e-11■■□□□ 13.3
SND1Q7KZF4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.18■■□□□ 1.141e-11■■□□□ 13.3
SND1Q7KZF4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.87■□□□□ 0.932e-6■■□□□ 13.3
SND1Q7KZF4 PTTG1IP-206ENST00000480234 398 ntTSL 320.79■□□□□ 0.921e-11■■□□□ 13.3
SND1Q7KZF4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.64■□□□□ 0.892e-6■■□□□ 13.3
SND1Q7KZF4 Z98883.1-201ENST00000409439 916 ntTSL 320.62■□□□□ 0.892e-6■■□□□ 13.3
SND1Q7KZF4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.872e-6■■□□□ 13.3
SND1Q7KZF4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.842e-6■■□□□ 13.3
SND1Q7KZF4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.31■□□□□ 0.841e-11■■□□□ 13.3
SND1Q7KZF4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.821e-11■■□□□ 13.3
SND1Q7KZF4 PIGQ-202ENST00000293874 603 ntTSL 419.81■□□□□ 0.762e-6■■□□□ 13.3
SND1Q7KZF4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.8■□□□□ 0.761e-11■■□□□ 13.3
SND1Q7KZF4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.762e-6■■□□□ 13.3
SND1Q7KZF4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.741e-11■■□□□ 13.3
SND1Q7KZF4 PRMT1-220ENST00000534676 915 ntTSL 219.58■□□□□ 0.721e-11■■□□□ 13.3
SND1Q7KZF4 PIGQ-207ENST00000439574 586 ntTSL 319.32■□□□□ 0.682e-6■■□□□ 13.3
SND1Q7KZF4 SREBF1-212ENST00000478616 882 ntTSL 519.26■□□□□ 0.678e-8■■□□□ 13.3
SND1Q7KZF4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.632e-6■■□□□ 13.3
SND1Q7KZF4 HSPH1-208ENST00000629751 1034 ntTSL 218.82■□□□□ 0.62e-6■■□□□ 13.3
SND1Q7KZF4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.52■□□□□ 0.562e-6■■□□□ 13.3
SND1Q7KZF4 PPP2R1A-202ENST00000391791 979 ntTSL 218.42■□□□□ 0.542e-6■■□□□ 13.3
SND1Q7KZF4 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.482e-6■■□□□ 13.3
SND1Q7KZF4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.84■□□□□ 0.451e-11■■□□□ 13.3
SND1Q7KZF4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.442e-6■■□□□ 13.3
SND1Q7KZF4 PIGQ-221ENST00000636657 2841 ntTSL 517.78■□□□□ 0.442e-6■■□□□ 13.3
SND1Q7KZF4 SYS1-DBNDD2-203ENST00000458187 673 ntAPPRIS P5 TSL 517.7■□□□□ 0.422e-6■■□□□ 13.3
SND1Q7KZF4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.393e-6■■□□□ 13.3
SND1Q7KZF4 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.29■□□□□ 0.361e-11■■□□□ 13.3
SND1Q7KZF4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.352e-6■■□□□ 13.3
SND1Q7KZF4 SYS1-205ENST00000453003 433 ntTSL 1 (best)17.07■□□□□ 0.322e-6■■□□□ 13.3
SND1Q7KZF4 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.312e-6■■□□□ 13.3
SND1Q7KZF4 SYS1-DBNDD2-201ENST00000419593 1313 ntAPPRIS ALT2 TSL 216.97■□□□□ 0.312e-6■■□□□ 13.3
SND1Q7KZF4 PRMT1-203ENST00000524771 713 ntTSL 316.89■□□□□ 0.291e-11■■□□□ 13.3
SND1Q7KZF4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.84■□□□□ 0.292e-6■■□□□ 13.3
SND1Q7KZF4 SYS1-206ENST00000457307 941 ntTSL 1 (best)16.84■□□□□ 0.292e-6■■□□□ 13.3
SND1Q7KZF4 PTTG1IP-205ENST00000474737 580 ntTSL 316.19■□□□□ 0.181e-11■■□□□ 13.3
SND1Q7KZF4 PRMT1-215ENST00000530070 525 ntTSL 1 (best)16■□□□□ 0.151e-11■■□□□ 13.3
SND1Q7KZF4 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.112e-6■■□□□ 13.3
SND1Q7KZF4 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC15.64■□□□□ 0.092e-6■■□□□ 13.3
SND1Q7KZF4 HSPH1-206ENST00000602786 3488 ntTSL 1 (best)15.64■□□□□ 0.092e-6■■□□□ 13.3
SND1Q7KZF4 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.092e-6■■□□□ 13.3
SND1Q7KZF4 ATP5G1-208ENST00000513781 759 ntTSL 315.01□□□□□ -0.011e-11■■□□□ 13.3
SND1Q7KZF4 SYS1-DBNDD2-204ENST00000475242 529 ntTSL 314.99□□□□□ -0.012e-6■■□□□ 13.3
SND1Q7KZF4 GPAT4-203ENST00000519853 768 ntTSL 514.79□□□□□ -0.042e-6■■□□□ 13.3
SND1Q7KZF4 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC14.57□□□□□ -0.081e-11■■□□□ 13.3
SND1Q7KZF4 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.092e-6■■□□□ 13.3
SND1Q7KZF4 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC14.26□□□□□ -0.132e-6■■□□□ 13.3
SND1Q7KZF4 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.143e-6■■□□□ 13.3
SND1Q7KZF4 ATP5G1-210ENST00000515060 433 ntTSL 313.93□□□□□ -0.181e-11■■□□□ 13.3
SND1Q7KZF4 SYS1-201ENST00000243918 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.22e-6■■□□□ 13.3
SND1Q7KZF4 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.222e-6■■□□□ 13.3
SND1Q7KZF4 PRMT1-207ENST00000527382 699 ntTSL 313.4□□□□□ -0.261e-11■■□□□ 13.3
SND1Q7KZF4 PRMT1-219ENST00000534465 779 ntTSL 313.4□□□□□ -0.261e-11■■□□□ 13.3
SND1Q7KZF4 BSCL2-203ENST00000360796 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.272e-6■■□□□ 13.3
SND1Q7KZF4 BSCL2-212ENST00000449636 545 ntTSL 313.2□□□□□ -0.32e-6■■□□□ 13.3
SND1Q7KZF4 FADS3-203ENST00000525094 403 ntTSL 513.02□□□□□ -0.332e-6■■□□□ 13.3
SND1Q7KZF4 BSCL2-215ENST00000468505 547 ntTSL 212.77□□□□□ -0.372e-6■■□□□ 13.3
SND1Q7KZF4 BSCL2-213ENST00000463679 881 ntTSL 212.76□□□□□ -0.372e-6■■□□□ 13.3
SND1Q7KZF4 PTTG1IP-207ENST00000494690 612 ntTSL 512.75□□□□□ -0.371e-11■■□□□ 13.3
SND1Q7KZF4 BSCL2-202ENST00000301781 1712 ntTSL 512.31□□□□□ -0.442e-6■■□□□ 13.3
SND1Q7KZF4 SYS1-DBNDD2-202ENST00000452133 674 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.482e-6■■□□□ 13.3
SND1Q7KZF4 PRMT1-212ENST00000529284 1182 ntTSL 511.91□□□□□ -0.51e-11■■□□□ 13.3
SND1Q7KZF4 HSPH1-209ENST00000630972 3570 ntTSL 1 (best) BASIC11.79□□□□□ -0.522e-6■■□□□ 13.3
SND1Q7KZF4 CD3D-201ENST00000300692 861 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.542e-6■■□□□ 13.3
SND1Q7KZF4 ATP5G1-204ENST00000503641 539 ntTSL 3 BASIC11.7□□□□□ -0.541e-11■■□□□ 13.3
SND1Q7KZF4 SYS1-204ENST00000426004 2915 ntTSL 2 BASIC11.67□□□□□ -0.542e-6■■□□□ 13.3
SND1Q7KZF4 ATP5G1-201ENST00000355938 598 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.61e-11■■□□□ 13.3
SND1Q7KZF4 GPAT4-210ENST00000521806 873 ntTSL 511.13□□□□□ -0.632e-6■■□□□ 13.3
SND1Q7KZF4 ATP5G1-209ENST00000514808 359 ntTSL 2 BASIC10.98□□□□□ -0.651e-11■■□□□ 13.3
SND1Q7KZF4 ATP5G1-205ENST00000504591 401 ntTSL 210.95□□□□□ -0.661e-11■■□□□ 13.3
SND1Q7KZF4 ATP5G1-206ENST00000506855 468 ntTSL 3 BASIC10.95□□□□□ -0.661e-11■■□□□ 13.3
Retrieved 100 of 13,567 protein–RNA pairs in 120.2 ms