Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF43Q68DV7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
RNF43Q68DV7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF43Q68DV7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF43Q68DV7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF43Q68DV7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF43Q68DV7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF43Q68DV7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
RNF43Q68DV7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF43Q68DV7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF43Q68DV7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RNF43Q68DV7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF43Q68DV7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF43Q68DV7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF43Q68DV7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF43Q68DV7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF43Q68DV7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF43Q68DV7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.24■□□□□ 0.83
RNF43Q68DV7 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF43Q68DV7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RNF43Q68DV7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.24■□□□□ 0.83
RNF43Q68DV7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.24■□□□□ 0.83
RNF43Q68DV7 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RNF43Q68DV7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF43Q68DV7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RNF43Q68DV7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RNF43Q68DV7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF43Q68DV7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF43Q68DV7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF43Q68DV7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF43Q68DV7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF43Q68DV7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF43Q68DV7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.23■□□□□ 0.83
RNF43Q68DV7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF43Q68DV7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF43Q68DV7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF43Q68DV7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
RNF43Q68DV7 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.23■□□□□ 0.83
RNF43Q68DV7 YBX1P10-201ENST00000444752 975 ntBASIC20.23■□□□□ 0.83
RNF43Q68DV7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
RNF43Q68DV7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.23■□□□□ 0.83
RNF43Q68DV7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF43Q68DV7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF43Q68DV7 KRT18P16-201ENST00000510337 1294 ntBASIC20.23■□□□□ 0.83
RNF43Q68DV7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.23■□□□□ 0.83
RNF43Q68DV7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF43Q68DV7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.23■□□□□ 0.83
RNF43Q68DV7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF43Q68DV7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.23■□□□□ 0.83
RNF43Q68DV7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF43Q68DV7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF43Q68DV7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF43Q68DV7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF43Q68DV7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF43Q68DV7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
RNF43Q68DV7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF43Q68DV7 AP006587.1-201ENST00000534129 1502 ntBASIC20.22■□□□□ 0.83
RNF43Q68DV7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF43Q68DV7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF43Q68DV7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.22■□□□□ 0.83
RNF43Q68DV7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF43Q68DV7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF43Q68DV7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF43Q68DV7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.22■□□□□ 0.83
RNF43Q68DV7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF43Q68DV7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF43Q68DV7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF43Q68DV7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.22■□□□□ 0.83
RNF43Q68DV7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.22■□□□□ 0.83
RNF43Q68DV7 AL049597.2-201ENST00000565575 961 ntBASIC20.22■□□□□ 0.83
RNF43Q68DV7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.22■□□□□ 0.83
RNF43Q68DV7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.22■□□□□ 0.83
RNF43Q68DV7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.22■□□□□ 0.83
RNF43Q68DV7 AL590326.2-201ENST00000625139 305 ntBASIC20.22■□□□□ 0.83
RNF43Q68DV7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF43Q68DV7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RNF43Q68DV7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.22■□□□□ 0.83
RNF43Q68DV7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RNF43Q68DV7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF43Q68DV7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RNF43Q68DV7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF43Q68DV7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF43Q68DV7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RNF43Q68DV7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF43Q68DV7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF43Q68DV7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RNF43Q68DV7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF43Q68DV7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF43Q68DV7 C1QL1P1-201ENST00000568105 661 ntBASIC20.21■□□□□ 0.83
RNF43Q68DV7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF43Q68DV7 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF43Q68DV7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF43Q68DV7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF43Q68DV7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF43Q68DV7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF43Q68DV7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RNF43Q68DV7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.21■□□□□ 0.83
RNF43Q68DV7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF43Q68DV7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF43Q68DV7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms