Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC22.19■■□□□ 1.14
USH1GQ495M9 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC22.19■■□□□ 1.14
USH1GQ495M9 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC22.19■■□□□ 1.14
USH1GQ495M9 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
USH1GQ495M9 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
USH1GQ495M9 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC22.19■■□□□ 1.14
USH1GQ495M9 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC22.19■■□□□ 1.14
USH1GQ495M9 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
USH1GQ495M9 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
USH1GQ495M9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
USH1GQ495M9 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
USH1GQ495M9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
USH1GQ495M9 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
USH1GQ495M9 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC22.18■■□□□ 1.14
USH1GQ495M9 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
USH1GQ495M9 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
USH1GQ495M9 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC22.18■■□□□ 1.14
USH1GQ495M9 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
USH1GQ495M9 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
USH1GQ495M9 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC22.18■■□□□ 1.14
USH1GQ495M9 AC096733.2-201ENST00000609937 1394 ntBASIC22.18■■□□□ 1.14
USH1GQ495M9 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
USH1GQ495M9 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
USH1GQ495M9 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
USH1GQ495M9 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC22.18■■□□□ 1.14
USH1GQ495M9 ECEL1P2-202ENST00000465689 757 ntBASIC22.18■■□□□ 1.14
USH1GQ495M9 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
USH1GQ495M9 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
USH1GQ495M9 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC22.18■■□□□ 1.14
USH1GQ495M9 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
USH1GQ495M9 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
USH1GQ495M9 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
USH1GQ495M9 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
USH1GQ495M9 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
USH1GQ495M9 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.17■■□□□ 1.14
USH1GQ495M9 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
USH1GQ495M9 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
USH1GQ495M9 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
USH1GQ495M9 HIST1H2APS4-201ENST00000362070 348 ntBASIC22.17■■□□□ 1.14
USH1GQ495M9 MIR1224-201ENST00000408193 85 ntBASIC22.17■■□□□ 1.14
USH1GQ495M9 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
USH1GQ495M9 TMPOP1-202ENST00000424642 1267 ntBASIC22.17■■□□□ 1.14
USH1GQ495M9 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC22.17■■□□□ 1.14
USH1GQ495M9 KRT18P57-201ENST00000443599 1254 ntBASIC22.17■■□□□ 1.14
USH1GQ495M9 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC22.17■■□□□ 1.14
USH1GQ495M9 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC22.17■■□□□ 1.14
USH1GQ495M9 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC22.17■■□□□ 1.14
USH1GQ495M9 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
USH1GQ495M9 AC104417.2-201ENST00000562989 1793 ntBASIC22.17■■□□□ 1.14
USH1GQ495M9 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
USH1GQ495M9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
USH1GQ495M9 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC22.17■■□□□ 1.14
USH1GQ495M9 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC22.17■■□□□ 1.14
USH1GQ495M9 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
USH1GQ495M9 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
USH1GQ495M9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC22.16■■□□□ 1.14
USH1GQ495M9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC22.16■■□□□ 1.14
USH1GQ495M9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC22.16■■□□□ 1.14
USH1GQ495M9 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
USH1GQ495M9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
USH1GQ495M9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
USH1GQ495M9 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
USH1GQ495M9 TSPY14P-201ENST00000303979 915 ntBASIC22.16■■□□□ 1.14
USH1GQ495M9 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC22.16■■□□□ 1.14
USH1GQ495M9 AC113347.1-201ENST00000413321 391 ntBASIC22.16■■□□□ 1.14
USH1GQ495M9 SLC25A3P1-201ENST00000443844 931 ntBASIC22.16■■□□□ 1.14
USH1GQ495M9 P4HB-223ENST00000576390 439 ntTSL 4 BASIC22.16■■□□□ 1.14
USH1GQ495M9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.16■■□□□ 1.14
USH1GQ495M9 ZNF815P-204ENST00000434898 1737 ntBASIC22.16■■□□□ 1.14
USH1GQ495M9 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC22.16■■□□□ 1.14
USH1GQ495M9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
USH1GQ495M9 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC22.15■■□□□ 1.14
USH1GQ495M9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
USH1GQ495M9 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
USH1GQ495M9 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC22.15■■□□□ 1.14
USH1GQ495M9 AC125437.2-201ENST00000625180 2167 ntBASIC22.15■■□□□ 1.14
USH1GQ495M9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
USH1GQ495M9 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
USH1GQ495M9 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC22.15■■□□□ 1.14
USH1GQ495M9 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC22.15■■□□□ 1.14
USH1GQ495M9 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC22.15■■□□□ 1.14
USH1GQ495M9 GLRB-205ENST00000512619 728 ntTSL 3 BASIC22.15■■□□□ 1.14
USH1GQ495M9 EGLN1P1-201ENST00000531623 762 ntBASIC22.15■■□□□ 1.14
USH1GQ495M9 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
USH1GQ495M9 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
USH1GQ495M9 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
USH1GQ495M9 CLN6-221ENST00000637494 765 ntTSL 5 BASIC22.15■■□□□ 1.14
USH1GQ495M9 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
USH1GQ495M9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC22.15■■□□□ 1.14
USH1GQ495M9 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
USH1GQ495M9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
USH1GQ495M9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
USH1GQ495M9 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
USH1GQ495M9 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
USH1GQ495M9 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC22.15■■□□□ 1.14
USH1GQ495M9 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
USH1GQ495M9 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.14■■□□□ 1.14
USH1GQ495M9 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
USH1GQ495M9 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC22.14■■□□□ 1.14
USH1GQ495M9 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms