Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL1Q00532 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL1Q00532 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CDKL1Q00532 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL1Q00532 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.98■□□□□ 0.63
CDKL1Q00532 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.98■□□□□ 0.63
CDKL1Q00532 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.98■□□□□ 0.63
CDKL1Q00532 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL1Q00532 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL1Q00532 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CDKL1Q00532 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.98■□□□□ 0.63
CDKL1Q00532 RNA5SP413-201ENST00000516373 109 ntBASIC18.98■□□□□ 0.63
CDKL1Q00532 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.98■□□□□ 0.63
CDKL1Q00532 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.98■□□□□ 0.63
CDKL1Q00532 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.98■□□□□ 0.63
CDKL1Q00532 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL1Q00532 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.98■□□□□ 0.63
CDKL1Q00532 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL1Q00532 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL1Q00532 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL1Q00532 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL1Q00532 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL1Q00532 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL1Q00532 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.98■□□□□ 0.63
CDKL1Q00532 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL1Q00532 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL1Q00532 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL1Q00532 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL1Q00532 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.97■□□□□ 0.63
CDKL1Q00532 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL1Q00532 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.97■□□□□ 0.63
CDKL1Q00532 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL1Q00532 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL1Q00532 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CDKL1Q00532 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.97■□□□□ 0.63
CDKL1Q00532 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.97■□□□□ 0.63
CDKL1Q00532 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL1Q00532 AC026366.1-201ENST00000488803 879 ntBASIC18.97■□□□□ 0.63
CDKL1Q00532 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.97■□□□□ 0.63
CDKL1Q00532 PRKY-204ENST00000533551 1019 ntBASIC18.97■□□□□ 0.63
CDKL1Q00532 KRT18P6-201ENST00000555540 1265 ntBASIC18.97■□□□□ 0.63
CDKL1Q00532 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.97■□□□□ 0.63
CDKL1Q00532 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL1Q00532 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.97■□□□□ 0.63
CDKL1Q00532 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL1Q00532 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL1Q00532 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL1Q00532 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL1Q00532 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL1Q00532 ZNF815P-204ENST00000434898 1737 ntBASIC18.97■□□□□ 0.63
CDKL1Q00532 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CDKL1Q00532 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL1Q00532 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.97■□□□□ 0.63
CDKL1Q00532 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKL1Q00532 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CDKL1Q00532 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.96■□□□□ 0.63
CDKL1Q00532 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.96■□□□□ 0.63
CDKL1Q00532 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.96■□□□□ 0.63
CDKL1Q00532 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDKL1Q00532 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDKL1Q00532 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.96■□□□□ 0.63
CDKL1Q00532 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.96■□□□□ 0.63
CDKL1Q00532 TUBB8P6-201ENST00000436895 1288 ntBASIC18.96■□□□□ 0.63
CDKL1Q00532 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.96■□□□□ 0.63
CDKL1Q00532 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.96■□□□□ 0.63
CDKL1Q00532 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.96■□□□□ 0.63
CDKL1Q00532 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.96■□□□□ 0.63
CDKL1Q00532 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.96■□□□□ 0.63
CDKL1Q00532 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CDKL1Q00532 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.96■□□□□ 0.63
CDKL1Q00532 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.96■□□□□ 0.63
CDKL1Q00532 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL1Q00532 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL1Q00532 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL1Q00532 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL1Q00532 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
CDKL1Q00532 AL032819.2-201ENST00000624543 2162 ntBASIC18.95■□□□□ 0.62
CDKL1Q00532 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL1Q00532 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL1Q00532 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.95■□□□□ 0.62
CDKL1Q00532 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL1Q00532 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CDKL1Q00532 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL1Q00532 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL1Q00532 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL1Q00532 KRT17P3-201ENST00000420566 1262 ntBASIC18.95■□□□□ 0.62
CDKL1Q00532 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.95■□□□□ 0.62
CDKL1Q00532 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.95■□□□□ 0.62
CDKL1Q00532 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL1Q00532 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.95■□□□□ 0.62
CDKL1Q00532 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.95■□□□□ 0.62
CDKL1Q00532 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CDKL1Q00532 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.95■□□□□ 0.62
CDKL1Q00532 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL1Q00532 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL1Q00532 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDKL1Q00532 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CDKL1Q00532 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.95■□□□□ 0.62
CDKL1Q00532 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CDKL1Q00532 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms