Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDH13P55290 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.87■□□□□ 0.61
CDH13P55290 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDH13P55290 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
CDH13P55290 CROCCP3-202ENST00000420820 1947 ntBASIC18.87■□□□□ 0.61
CDH13P55290 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.87■□□□□ 0.61
CDH13P55290 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.87■□□□□ 0.61
CDH13P55290 PNMA6B-201ENST00000538162 1200 ntBASIC18.87■□□□□ 0.61
CDH13P55290 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.87■□□□□ 0.61
CDH13P55290 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.87■□□□□ 0.61
CDH13P55290 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.87■□□□□ 0.61
CDH13P55290 AC104417.2-201ENST00000562989 1793 ntBASIC18.87■□□□□ 0.61
CDH13P55290 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.87■□□□□ 0.61
CDH13P55290 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.87■□□□□ 0.61
CDH13P55290 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH13P55290 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDH13P55290 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.87■□□□□ 0.61
CDH13P55290 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CDH13P55290 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.87■□□□□ 0.61
CDH13P55290 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
CDH13P55290 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH13P55290 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH13P55290 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
CDH13P55290 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDH13P55290 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CDH13P55290 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDH13P55290 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CDH13P55290 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH13P55290 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CDH13P55290 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDH13P55290 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.86■□□□□ 0.61
CDH13P55290 NEFHP1-201ENST00000412845 2629 ntBASIC18.86■□□□□ 0.61
CDH13P55290 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH13P55290 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.86■□□□□ 0.61
CDH13P55290 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH13P55290 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.86■□□□□ 0.61
CDH13P55290 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.86■□□□□ 0.61
CDH13P55290 AC060766.5-201ENST00000590539 871 ntBASIC18.86■□□□□ 0.61
CDH13P55290 AC083880.1-201ENST00000608266 535 ntBASIC18.86■□□□□ 0.61
CDH13P55290 AL121906.2-201ENST00000621597 723 ntBASIC18.86■□□□□ 0.61
CDH13P55290 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH13P55290 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH13P55290 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDH13P55290 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH13P55290 AC006333.2-201ENST00000607957 2099 ntBASIC18.86■□□□□ 0.61
CDH13P55290 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDH13P55290 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDH13P55290 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH13P55290 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
CDH13P55290 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH13P55290 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.85■□□□□ 0.61
CDH13P55290 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDH13P55290 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.85■□□□□ 0.61
CDH13P55290 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH13P55290 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CDH13P55290 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH13P55290 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.85■□□□□ 0.61
CDH13P55290 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.85■□□□□ 0.61
CDH13P55290 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
CDH13P55290 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH13P55290 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDH13P55290 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH13P55290 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDH13P55290 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDH13P55290 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH13P55290 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDH13P55290 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH13P55290 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH13P55290 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH13P55290 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CDH13P55290 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH13P55290 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.84■□□□□ 0.61
CDH13P55290 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH13P55290 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH13P55290 KRT8P8-201ENST00000434750 1448 ntBASIC18.84■□□□□ 0.61
CDH13P55290 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH13P55290 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH13P55290 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH13P55290 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CDH13P55290 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.84■□□□□ 0.61
CDH13P55290 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH13P55290 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CDH13P55290 YBX1P10-201ENST00000444752 975 ntBASIC18.84■□□□□ 0.61
CDH13P55290 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.84■□□□□ 0.61
CDH13P55290 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.84■□□□□ 0.61
CDH13P55290 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.84■□□□□ 0.61
CDH13P55290 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.84■□□□□ 0.61
CDH13P55290 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.84■□□□□ 0.61
CDH13P55290 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.84■□□□□ 0.61
CDH13P55290 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.84■□□□□ 0.61
CDH13P55290 AC120498.8-201ENST00000614275 531 ntBASIC18.84■□□□□ 0.61
CDH13P55290 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CDH13P55290 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH13P55290 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CDH13P55290 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH13P55290 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDH13P55290 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.83■□□□□ 0.61
CDH13P55290 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CDH13P55290 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDH13P55290 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms