Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.27■□□□□ 0.36
LHX2P50458 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.27■□□□□ 0.36
LHX2P50458 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LHX2P50458 C2orf69P3-201ENST00000565542 1120 ntBASIC17.27■□□□□ 0.36
LHX2P50458 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.27■□□□□ 0.36
LHX2P50458 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LHX2P50458 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LHX2P50458 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.27■□□□□ 0.36
LHX2P50458 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.27■□□□□ 0.35
LHX2P50458 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LHX2P50458 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LHX2P50458 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LHX2P50458 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LHX2P50458 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LHX2P50458 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LHX2P50458 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LHX2P50458 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.26■□□□□ 0.35
LHX2P50458 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
LHX2P50458 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LHX2P50458 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.26■□□□□ 0.35
LHX2P50458 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LHX2P50458 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
LHX2P50458 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.26■□□□□ 0.35
LHX2P50458 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.26■□□□□ 0.35
LHX2P50458 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LHX2P50458 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LHX2P50458 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.26■□□□□ 0.35
LHX2P50458 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LHX2P50458 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LHX2P50458 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.26■□□□□ 0.35
LHX2P50458 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.26■□□□□ 0.35
LHX2P50458 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.26■□□□□ 0.35
LHX2P50458 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.26■□□□□ 0.35
LHX2P50458 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LHX2P50458 SDHAP1-207ENST00000440850 2000 ntBASIC17.26■□□□□ 0.35
LHX2P50458 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LHX2P50458 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LHX2P50458 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LHX2P50458 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LHX2P50458 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.26■□□□□ 0.35
LHX2P50458 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LHX2P50458 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.25■□□□□ 0.35
LHX2P50458 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LHX2P50458 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.25■□□□□ 0.35
LHX2P50458 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LHX2P50458 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LHX2P50458 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LHX2P50458 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LHX2P50458 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LHX2P50458 TSPY14P-201ENST00000303979 915 ntBASIC17.25■□□□□ 0.35
LHX2P50458 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LHX2P50458 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.25■□□□□ 0.35
LHX2P50458 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.25■□□□□ 0.35
LHX2P50458 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.25■□□□□ 0.35
LHX2P50458 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.25■□□□□ 0.35
LHX2P50458 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.25■□□□□ 0.35
LHX2P50458 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.25■□□□□ 0.35
LHX2P50458 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LHX2P50458 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LHX2P50458 CKBP1-201ENST00000565489 1086 ntBASIC17.25■□□□□ 0.35
LHX2P50458 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
LHX2P50458 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LHX2P50458 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.25■□□□□ 0.35
LHX2P50458 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.25■□□□□ 0.35
LHX2P50458 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.25■□□□□ 0.35
LHX2P50458 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
LHX2P50458 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LHX2P50458 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LHX2P50458 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LHX2P50458 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LHX2P50458 AC073130.3-201ENST00000624389 2278 ntBASIC17.24■□□□□ 0.35
LHX2P50458 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.24■□□□□ 0.35
LHX2P50458 KRT18P22-201ENST00000402024 1347 ntBASIC17.24■□□□□ 0.35
LHX2P50458 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LHX2P50458 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LHX2P50458 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LHX2P50458 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.24■□□□□ 0.35
LHX2P50458 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LHX2P50458 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LHX2P50458 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.24■□□□□ 0.35
LHX2P50458 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.24■□□□□ 0.35
LHX2P50458 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LHX2P50458 EGLN1P1-201ENST00000531623 762 ntBASIC17.24■□□□□ 0.35
LHX2P50458 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.24■□□□□ 0.35
LHX2P50458 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LHX2P50458 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LHX2P50458 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LHX2P50458 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.24■□□□□ 0.35
LHX2P50458 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LHX2P50458 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.24■□□□□ 0.35
LHX2P50458 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LHX2P50458 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LHX2P50458 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.23■□□□□ 0.35
LHX2P50458 KRT8P11-201ENST00000409686 1436 ntBASIC17.23■□□□□ 0.35
LHX2P50458 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LHX2P50458 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.23■□□□□ 0.35
LHX2P50458 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LHX2P50458 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LHX2P50458 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
LHX2P50458 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms