Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRP9P49458 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRP9P49458 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.1■□□□□ 0.33
SRP9P49458 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRP9P49458 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.1■□□□□ 0.33
SRP9P49458 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRP9P49458 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRP9P49458 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.09■□□□□ 0.33
SRP9P49458 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRP9P49458 AC009113.1-201ENST00000570267 2443 ntBASIC17.09■□□□□ 0.33
SRP9P49458 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SRP9P49458 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRP9P49458 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.09■□□□□ 0.33
SRP9P49458 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
SRP9P49458 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRP9P49458 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SRP9P49458 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRP9P49458 AL133373.2-201ENST00000623187 2828 ntBASIC17.09■□□□□ 0.33
SRP9P49458 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.09■□□□□ 0.33
SRP9P49458 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.09■□□□□ 0.33
SRP9P49458 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.09■□□□□ 0.33
SRP9P49458 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.09■□□□□ 0.33
SRP9P49458 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SRP9P49458 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SRP9P49458 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.09■□□□□ 0.33
SRP9P49458 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRP9P49458 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.09■□□□□ 0.33
SRP9P49458 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.09■□□□□ 0.33
SRP9P49458 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRP9P49458 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRP9P49458 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SRP9P49458 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SRP9P49458 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SRP9P49458 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SRP9P49458 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SRP9P49458 PCDHB18P-201ENST00000524813 2368 ntBASIC17.08■□□□□ 0.33
SRP9P49458 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SRP9P49458 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
SRP9P49458 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SRP9P49458 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
SRP9P49458 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SRP9P49458 CROCCP3-202ENST00000420820 1947 ntBASIC17.08■□□□□ 0.33
SRP9P49458 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SRP9P49458 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRP9P49458 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SRP9P49458 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRP9P49458 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SRP9P49458 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SRP9P49458 HLA-G-202ENST00000376815 851 ntBASIC17.08■□□□□ 0.32
SRP9P49458 HLA-G-203ENST00000376818 1127 ntBASIC17.08■□□□□ 0.32
SRP9P49458 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SRP9P49458 AL390719.1-204ENST00000412397 1219 ntBASIC17.08■□□□□ 0.32
SRP9P49458 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SRP9P49458 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRP9P49458 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
SRP9P49458 AC083880.1-201ENST00000608266 535 ntBASIC17.08■□□□□ 0.32
SRP9P49458 HLA-B-256ENST00000639848 1089 ntBASIC17.08■□□□□ 0.32
SRP9P49458 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRP9P49458 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRP9P49458 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
SRP9P49458 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRP9P49458 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SRP9P49458 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SRP9P49458 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.08■□□□□ 0.32
SRP9P49458 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.08■□□□□ 0.32
SRP9P49458 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRP9P49458 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRP9P49458 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.07■□□□□ 0.32
SRP9P49458 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.07■□□□□ 0.32
SRP9P49458 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SRP9P49458 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SRP9P49458 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.07■□□□□ 0.32
SRP9P49458 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.07■□□□□ 0.32
SRP9P49458 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRP9P49458 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRP9P49458 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRP9P49458 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SRP9P49458 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRP9P49458 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRP9P49458 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.07■□□□□ 0.32
SRP9P49458 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.07■□□□□ 0.32
SRP9P49458 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
SRP9P49458 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SRP9P49458 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SRP9P49458 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.07■□□□□ 0.32
SRP9P49458 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.07■□□□□ 0.32
SRP9P49458 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.07■□□□□ 0.32
SRP9P49458 AC023632.3-201ENST00000521633 145 ntBASIC17.07■□□□□ 0.32
SRP9P49458 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.07■□□□□ 0.32
SRP9P49458 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.07■□□□□ 0.32
SRP9P49458 AC060766.5-201ENST00000590539 871 ntBASIC17.07■□□□□ 0.32
SRP9P49458 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRP9P49458 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SRP9P49458 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRP9P49458 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.07■□□□□ 0.32
SRP9P49458 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SRP9P49458 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SRP9P49458 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRP9P49458 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SRP9P49458 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms