Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC9A3P48764 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC9A3P48764 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC9A3P48764 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SLC9A3P48764 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.68■□□□□ 0.42
SLC9A3P48764 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC9A3P48764 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SLC9A3P48764 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SLC9A3P48764 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC9A3P48764 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC9A3P48764 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC9A3P48764 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC9A3P48764 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC9A3P48764 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC9A3P48764 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC9A3P48764 DUSP5P2-201ENST00000426873 1033 ntBASIC17.67■□□□□ 0.42
SLC9A3P48764 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC9A3P48764 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.67■□□□□ 0.42
SLC9A3P48764 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.67■□□□□ 0.42
SLC9A3P48764 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC9A3P48764 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.67■□□□□ 0.42
SLC9A3P48764 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.67■□□□□ 0.42
SLC9A3P48764 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
SLC9A3P48764 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC9A3P48764 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC9A3P48764 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC9A3P48764 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC9A3P48764 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC9A3P48764 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC9A3P48764 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
SLC9A3P48764 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC9A3P48764 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC9A3P48764 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC9A3P48764 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC9A3P48764 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC9A3P48764 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC9A3P48764 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.66■□□□□ 0.42
SLC9A3P48764 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC9A3P48764 AC006970.2-201ENST00000450065 779 ntBASIC17.66■□□□□ 0.42
SLC9A3P48764 AC083906.2-201ENST00000511578 360 ntBASIC17.66■□□□□ 0.42
SLC9A3P48764 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC9A3P48764 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.66■□□□□ 0.42
SLC9A3P48764 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC9A3P48764 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SLC9A3P48764 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC9A3P48764 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC9A3P48764 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC9A3P48764 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.66■□□□□ 0.42
SLC9A3P48764 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC9A3P48764 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC9A3P48764 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC9A3P48764 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC9A3P48764 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.65■□□□□ 0.42
SLC9A3P48764 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC9A3P48764 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC9A3P48764 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC9A3P48764 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC9A3P48764 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC9A3P48764 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC9A3P48764 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC9A3P48764 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SLC9A3P48764 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SLC9A3P48764 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SLC9A3P48764 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SLC9A3P48764 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC9A3P48764 MIR935-201ENST00000401179 91 ntBASIC17.65■□□□□ 0.42
SLC9A3P48764 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC9A3P48764 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.65■□□□□ 0.42
SLC9A3P48764 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC9A3P48764 AC091874.3-201ENST00000512672 1195 ntBASIC17.65■□□□□ 0.42
SLC9A3P48764 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC9A3P48764 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.65■□□□□ 0.42
SLC9A3P48764 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC9A3P48764 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC9A3P48764 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC9A3P48764 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SLC9A3P48764 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC9A3P48764 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC9A3P48764 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC9A3P48764 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC9A3P48764 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC9A3P48764 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.65■□□□□ 0.42
SLC9A3P48764 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.64■□□□□ 0.42
SLC9A3P48764 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.64■□□□□ 0.42
SLC9A3P48764 LINC01465-201ENST00000408887 1940 ntBASIC17.64■□□□□ 0.42
SLC9A3P48764 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
SLC9A3P48764 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SLC9A3P48764 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SLC9A3P48764 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SLC9A3P48764 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC9A3P48764 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC9A3P48764 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC9A3P48764 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC9A3P48764 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC9A3P48764 SLC29A4P1-201ENST00000398760 971 ntBASIC17.64■□□□□ 0.41
SLC9A3P48764 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.64■□□□□ 0.41
SLC9A3P48764 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC9A3P48764 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC9A3P48764 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SLC9A3P48764 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms