Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
PCP4P48539 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC13.38□□□□□ -0.27
PCP4P48539 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCP4P48539 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
PCP4P48539 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCP4P48539 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.38□□□□□ -0.27
PCP4P48539 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCP4P48539 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCP4P48539 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCP4P48539 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.38□□□□□ -0.27
PCP4P48539 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.38□□□□□ -0.27
PCP4P48539 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PCP4P48539 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCP4P48539 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
PCP4P48539 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
PCP4P48539 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCP4P48539 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
PCP4P48539 AC015656.1-201ENST00000624209 3578 ntBASIC13.37□□□□□ -0.27
PCP4P48539 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
PCP4P48539 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PCP4P48539 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PCP4P48539 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC13.37□□□□□ -0.27
PCP4P48539 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
PCP4P48539 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCP4P48539 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC13.37□□□□□ -0.27
PCP4P48539 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.37□□□□□ -0.27
PCP4P48539 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCP4P48539 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCP4P48539 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC13.37□□□□□ -0.27
PCP4P48539 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.37□□□□□ -0.27
PCP4P48539 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
PCP4P48539 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
PCP4P48539 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCP4P48539 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PCP4P48539 DBET-201ENST00000630918 3363 ntBASIC13.37□□□□□ -0.27
PCP4P48539 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCP4P48539 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCP4P48539 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PCP4P48539 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
PCP4P48539 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PCP4P48539 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PCP4P48539 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
PCP4P48539 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PCP4P48539 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCP4P48539 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCP4P48539 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCP4P48539 AL023775.1-201ENST00000454907 1746 ntBASIC13.36□□□□□ -0.27
PCP4P48539 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCP4P48539 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCP4P48539 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCP4P48539 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCP4P48539 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCP4P48539 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCP4P48539 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCP4P48539 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCP4P48539 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCP4P48539 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.36□□□□□ -0.27
PCP4P48539 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PCP4P48539 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCP4P48539 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC13.36□□□□□ -0.27
PCP4P48539 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
PCP4P48539 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCP4P48539 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC13.36□□□□□ -0.27
PCP4P48539 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCP4P48539 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.36□□□□□ -0.27
PCP4P48539 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCP4P48539 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCP4P48539 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC13.36□□□□□ -0.27
PCP4P48539 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCP4P48539 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCP4P48539 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCP4P48539 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.35□□□□□ -0.27
PCP4P48539 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PCP4P48539 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PCP4P48539 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PCP4P48539 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC13.35□□□□□ -0.27
PCP4P48539 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCP4P48539 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
PCP4P48539 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCP4P48539 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC13.35□□□□□ -0.27
PCP4P48539 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCP4P48539 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
PCP4P48539 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCP4P48539 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.35□□□□□ -0.27
PCP4P48539 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCP4P48539 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCP4P48539 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCP4P48539 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCP4P48539 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCP4P48539 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PCP4P48539 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC13.35□□□□□ -0.27
PCP4P48539 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCP4P48539 TCF3P1-201ENST00000423021 1937 ntBASIC13.35□□□□□ -0.27
PCP4P48539 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.35□□□□□ -0.27
PCP4P48539 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCP4P48539 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PCP4P48539 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.35□□□□□ -0.27
PCP4P48539 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCP4P48539 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
PCP4P48539 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms