Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.65■□□□□ 0.58
SLC6A12P48065 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.65■□□□□ 0.58
SLC6A12P48065 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.65■□□□□ 0.58
SLC6A12P48065 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SLC6A12P48065 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC6A12P48065 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC6A12P48065 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SLC6A12P48065 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC6A12P48065 AL049812.1-201ENST00000432563 2267 ntBASIC18.65■□□□□ 0.58
SLC6A12P48065 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC6A12P48065 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.65■□□□□ 0.58
SLC6A12P48065 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
SLC6A12P48065 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SLC6A12P48065 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SLC6A12P48065 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SLC6A12P48065 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
SLC6A12P48065 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.64■□□□□ 0.57
SLC6A12P48065 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SLC6A12P48065 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A12P48065 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SLC6A12P48065 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A12P48065 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.64■□□□□ 0.57
SLC6A12P48065 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.64■□□□□ 0.57
SLC6A12P48065 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.64■□□□□ 0.57
SLC6A12P48065 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.64■□□□□ 0.57
SLC6A12P48065 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.64■□□□□ 0.57
SLC6A12P48065 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A12P48065 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A12P48065 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A12P48065 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A12P48065 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A12P48065 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A12P48065 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SLC6A12P48065 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SLC6A12P48065 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A12P48065 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SLC6A12P48065 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC6A12P48065 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SLC6A12P48065 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A12P48065 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A12P48065 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SLC6A12P48065 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A12P48065 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SLC6A12P48065 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SLC6A12P48065 IRX1P1-201ENST00000438849 1838 ntBASIC18.63■□□□□ 0.57
SLC6A12P48065 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.63■□□□□ 0.57
SLC6A12P48065 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A12P48065 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A12P48065 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A12P48065 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A12P48065 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SLC6A12P48065 TSPY20P-201ENST00000450910 630 ntBASIC18.63■□□□□ 0.57
SLC6A12P48065 RPPH1-201ENST00000516869 333 ntBASIC18.63■□□□□ 0.57
SLC6A12P48065 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.63■□□□□ 0.57
SLC6A12P48065 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.63■□□□□ 0.57
SLC6A12P48065 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC6A12P48065 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.63■□□□□ 0.57
SLC6A12P48065 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC6A12P48065 ITM2C-210ENST00000620962 501 ntBASIC18.63■□□□□ 0.57
SLC6A12P48065 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A12P48065 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A12P48065 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A12P48065 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A12P48065 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A12P48065 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A12P48065 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC6A12P48065 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A12P48065 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC6A12P48065 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A12P48065 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A12P48065 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SLC6A12P48065 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A12P48065 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A12P48065 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A12P48065 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A12P48065 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC6A12P48065 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A12P48065 FAM201B-201ENST00000458407 597 ntBASIC18.62■□□□□ 0.57
SLC6A12P48065 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.62■□□□□ 0.57
SLC6A12P48065 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
SLC6A12P48065 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SLC6A12P48065 AL445675.2-201ENST00000620291 557 ntBASIC18.62■□□□□ 0.57
SLC6A12P48065 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC6A12P48065 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A12P48065 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.62■□□□□ 0.57
SLC6A12P48065 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.62■□□□□ 0.57
SLC6A12P48065 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.62■□□□□ 0.57
SLC6A12P48065 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A12P48065 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A12P48065 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A12P48065 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC6A12P48065 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A12P48065 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A12P48065 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.61■□□□□ 0.57
SLC6A12P48065 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A12P48065 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A12P48065 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SLC6A12P48065 FP475955.4-201ENST00000623131 1990 ntBASIC18.61■□□□□ 0.57
SLC6A12P48065 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC6A12P48065 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms