Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MMP13P45452 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MMP13P45452 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MMP13P45452 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
MMP13P45452 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MMP13P45452 TSPY20P-201ENST00000450910 630 ntBASIC20.06■□□□□ 0.8
MMP13P45452 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.06■□□□□ 0.8
MMP13P45452 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
MMP13P45452 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.06■□□□□ 0.8
MMP13P45452 AC233263.1-201ENST00000578059 224 ntBASIC20.06■□□□□ 0.8
MMP13P45452 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
MMP13P45452 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
MMP13P45452 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.06■□□□□ 0.8
MMP13P45452 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MMP13P45452 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MMP13P45452 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MMP13P45452 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
MMP13P45452 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MMP13P45452 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
MMP13P45452 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.05■□□□□ 0.8
MMP13P45452 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
MMP13P45452 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MMP13P45452 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MMP13P45452 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
MMP13P45452 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
MMP13P45452 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MMP13P45452 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MMP13P45452 FAM201B-201ENST00000458407 597 ntBASIC20.05■□□□□ 0.8
MMP13P45452 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.05■□□□□ 0.8
MMP13P45452 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.05■□□□□ 0.8
MMP13P45452 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.05■□□□□ 0.8
MMP13P45452 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MMP13P45452 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
MMP13P45452 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.05■□□□□ 0.8
MMP13P45452 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
MMP13P45452 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
MMP13P45452 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MMP13P45452 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MMP13P45452 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MMP13P45452 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MMP13P45452 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
MMP13P45452 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MMP13P45452 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
MMP13P45452 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.04■□□□□ 0.8
MMP13P45452 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MMP13P45452 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MMP13P45452 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
MMP13P45452 CROCCP3-202ENST00000420820 1947 ntBASIC20.04■□□□□ 0.8
MMP13P45452 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MMP13P45452 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.04■□□□□ 0.8
MMP13P45452 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MMP13P45452 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MMP13P45452 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.04■□□□□ 0.8
MMP13P45452 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.04■□□□□ 0.8
MMP13P45452 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MMP13P45452 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MMP13P45452 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.04■□□□□ 0.8
MMP13P45452 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.04■□□□□ 0.8
MMP13P45452 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MMP13P45452 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.04■□□□□ 0.8
MMP13P45452 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
MMP13P45452 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.04■□□□□ 0.8
MMP13P45452 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.04■□□□□ 0.8
MMP13P45452 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.04■□□□□ 0.8
MMP13P45452 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.04■□□□□ 0.8
MMP13P45452 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.04■□□□□ 0.8
MMP13P45452 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MMP13P45452 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MMP13P45452 AC073648.6-201ENST00000641589 218 ntBASIC20.04■□□□□ 0.8
MMP13P45452 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MMP13P45452 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MMP13P45452 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MMP13P45452 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MMP13P45452 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MMP13P45452 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.04■□□□□ 0.8
MMP13P45452 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
MMP13P45452 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MMP13P45452 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MMP13P45452 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MMP13P45452 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.03■□□□□ 0.8
MMP13P45452 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MMP13P45452 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
MMP13P45452 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
MMP13P45452 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MMP13P45452 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
MMP13P45452 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.03■□□□□ 0.8
MMP13P45452 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
MMP13P45452 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
MMP13P45452 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MMP13P45452 PRKY-204ENST00000533551 1019 ntBASIC20.03■□□□□ 0.8
MMP13P45452 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.03■□□□□ 0.8
MMP13P45452 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MMP13P45452 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
MMP13P45452 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MMP13P45452 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
MMP13P45452 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
MMP13P45452 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
MMP13P45452 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.03■□□□□ 0.8
MMP13P45452 AP006587.1-201ENST00000534129 1502 ntBASIC20.02■□□□□ 0.8
MMP13P45452 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms