Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SSR1P43307 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSR1P43307 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SSR1P43307 AP000974.1-201ENST00000623909 2387 ntBASIC20.49■□□□□ 0.87
SSR1P43307 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSR1P43307 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SSR1P43307 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.49■□□□□ 0.87
SSR1P43307 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SSR1P43307 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.49■□□□□ 0.87
SSR1P43307 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.49■□□□□ 0.87
SSR1P43307 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.49■□□□□ 0.87
SSR1P43307 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.49■□□□□ 0.87
SSR1P43307 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.49■□□□□ 0.87
SSR1P43307 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.49■□□□□ 0.87
SSR1P43307 AC060766.5-201ENST00000590539 871 ntBASIC20.49■□□□□ 0.87
SSR1P43307 AC083880.1-201ENST00000608266 535 ntBASIC20.49■□□□□ 0.87
SSR1P43307 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSR1P43307 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSR1P43307 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSR1P43307 AL020996.1-203ENST00000536896 2307 ntBASIC20.49■□□□□ 0.87
SSR1P43307 AC098818.2-201ENST00000564925 2320 ntBASIC20.49■□□□□ 0.87
SSR1P43307 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSR1P43307 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSR1P43307 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.48■□□□□ 0.87
SSR1P43307 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSR1P43307 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSR1P43307 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SSR1P43307 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSR1P43307 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSR1P43307 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSR1P43307 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSR1P43307 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SSR1P43307 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSR1P43307 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.48■□□□□ 0.87
SSR1P43307 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SSR1P43307 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.48■□□□□ 0.87
SSR1P43307 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.48■□□□□ 0.87
SSR1P43307 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.48■□□□□ 0.87
SSR1P43307 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.48■□□□□ 0.87
SSR1P43307 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.48■□□□□ 0.87
SSR1P43307 AC104771.1-201ENST00000603335 964 ntBASIC20.48■□□□□ 0.87
SSR1P43307 AC133041.1-202ENST00000642053 222 ntBASIC20.48■□□□□ 0.87
SSR1P43307 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSR1P43307 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SSR1P43307 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSR1P43307 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SSR1P43307 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SSR1P43307 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSR1P43307 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSR1P43307 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSR1P43307 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SSR1P43307 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SSR1P43307 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.47■□□□□ 0.87
SSR1P43307 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.47■□□□□ 0.87
SSR1P43307 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
SSR1P43307 AC069152.1-201ENST00000438030 544 ntBASIC20.47■□□□□ 0.87
SSR1P43307 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSR1P43307 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SSR1P43307 SOX15-203ENST00000570788 1093 ntBASIC20.47■□□□□ 0.87
SSR1P43307 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SSR1P43307 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SSR1P43307 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.47■□□□□ 0.87
SSR1P43307 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.47■□□□□ 0.87
SSR1P43307 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSR1P43307 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.47■□□□□ 0.87
SSR1P43307 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SSR1P43307 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.47■□□□□ 0.87
SSR1P43307 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SSR1P43307 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSR1P43307 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SSR1P43307 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSR1P43307 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SSR1P43307 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.47■□□□□ 0.87
SSR1P43307 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSR1P43307 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSR1P43307 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SSR1P43307 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SSR1P43307 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSR1P43307 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.46■□□□□ 0.87
SSR1P43307 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SSR1P43307 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSR1P43307 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SSR1P43307 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
SSR1P43307 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.46■□□□□ 0.87
SSR1P43307 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSR1P43307 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSR1P43307 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSR1P43307 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSR1P43307 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSR1P43307 AL355802.2-201ENST00000402069 882 ntBASIC20.46■□□□□ 0.87
SSR1P43307 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.46■□□□□ 0.87
SSR1P43307 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.46■□□□□ 0.87
SSR1P43307 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.46■□□□□ 0.87
SSR1P43307 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSR1P43307 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.46■□□□□ 0.87
SSR1P43307 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSR1P43307 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSR1P43307 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSR1P43307 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.46■□□□□ 0.87
SSR1P43307 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms