Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT20P35900 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.34■□□□□ 0.53
KRT20P35900 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.34■□□□□ 0.53
KRT20P35900 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.34■□□□□ 0.53
KRT20P35900 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
KRT20P35900 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT20P35900 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
KRT20P35900 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT20P35900 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.34■□□□□ 0.53
KRT20P35900 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.34■□□□□ 0.53
KRT20P35900 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT20P35900 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT20P35900 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
KRT20P35900 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
KRT20P35900 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
KRT20P35900 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
KRT20P35900 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.33■□□□□ 0.53
KRT20P35900 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT20P35900 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.33■□□□□ 0.52
KRT20P35900 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.33■□□□□ 0.52
KRT20P35900 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.33■□□□□ 0.52
KRT20P35900 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.33■□□□□ 0.52
KRT20P35900 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.33■□□□□ 0.52
KRT20P35900 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
KRT20P35900 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
KRT20P35900 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
KRT20P35900 PHGDH-210ENST00000641115 1638 ntBASIC18.33■□□□□ 0.52
KRT20P35900 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.33■□□□□ 0.52
KRT20P35900 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.33■□□□□ 0.52
KRT20P35900 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.33■□□□□ 0.52
KRT20P35900 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.33■□□□□ 0.52
KRT20P35900 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
KRT20P35900 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT20P35900 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.32■□□□□ 0.52
KRT20P35900 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT20P35900 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT20P35900 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT20P35900 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT20P35900 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.32■□□□□ 0.52
KRT20P35900 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KRT20P35900 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT20P35900 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
KRT20P35900 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
KRT20P35900 KRT17P3-201ENST00000420566 1262 ntBASIC18.32■□□□□ 0.52
KRT20P35900 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.32■□□□□ 0.52
KRT20P35900 RPS2P52-201ENST00000469610 820 ntBASIC18.32■□□□□ 0.52
KRT20P35900 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.32■□□□□ 0.52
KRT20P35900 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.32■□□□□ 0.52
KRT20P35900 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.32■□□□□ 0.52
KRT20P35900 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.32■□□□□ 0.52
KRT20P35900 AC120498.8-201ENST00000614275 531 ntBASIC18.32■□□□□ 0.52
KRT20P35900 AL121906.2-201ENST00000621597 723 ntBASIC18.32■□□□□ 0.52
KRT20P35900 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT20P35900 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
KRT20P35900 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KRT20P35900 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KRT20P35900 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
KRT20P35900 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.32■□□□□ 0.52
KRT20P35900 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
KRT20P35900 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRT20P35900 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
KRT20P35900 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.31■□□□□ 0.52
KRT20P35900 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT20P35900 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.31■□□□□ 0.52
KRT20P35900 AC026366.1-201ENST00000488803 879 ntBASIC18.31■□□□□ 0.52
KRT20P35900 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
KRT20P35900 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.31■□□□□ 0.52
KRT20P35900 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT20P35900 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT20P35900 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
KRT20P35900 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT20P35900 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRT20P35900 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT20P35900 Z82202.1-201ENST00000623446 1880 ntBASIC18.31■□□□□ 0.52
KRT20P35900 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
KRT20P35900 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT20P35900 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT20P35900 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT20P35900 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT20P35900 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRT20P35900 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
KRT20P35900 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
KRT20P35900 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
KRT20P35900 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT20P35900 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT20P35900 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT20P35900 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT20P35900 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT20P35900 ESRRAP1-201ENST00000400596 1257 ntBASIC18.3■□□□□ 0.52
KRT20P35900 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRT20P35900 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRT20P35900 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
KRT20P35900 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
KRT20P35900 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.3■□□□□ 0.52
KRT20P35900 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRT20P35900 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
KRT20P35900 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT20P35900 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT20P35900 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRT20P35900 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms