Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSP1P33241 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSP1P33241 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
LSP1P33241 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LSP1P33241 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSP1P33241 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.37■□□□□ 0.69
LSP1P33241 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSP1P33241 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSP1P33241 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.37■□□□□ 0.69
LSP1P33241 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LSP1P33241 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LSP1P33241 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSP1P33241 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
LSP1P33241 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LSP1P33241 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LSP1P33241 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.37■□□□□ 0.69
LSP1P33241 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
LSP1P33241 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSP1P33241 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSP1P33241 LINC00896-202ENST00000609602 2128 ntBASIC19.37■□□□□ 0.69
LSP1P33241 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSP1P33241 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSP1P33241 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSP1P33241 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
LSP1P33241 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.37■□□□□ 0.69
LSP1P33241 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LSP1P33241 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.36■□□□□ 0.69
LSP1P33241 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
LSP1P33241 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.36■□□□□ 0.69
LSP1P33241 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.36■□□□□ 0.69
LSP1P33241 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.36■□□□□ 0.69
LSP1P33241 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LSP1P33241 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
LSP1P33241 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
LSP1P33241 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LSP1P33241 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LSP1P33241 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LSP1P33241 AC105265.2-201ENST00000467189 838 ntBASIC19.36■□□□□ 0.69
LSP1P33241 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.36■□□□□ 0.69
LSP1P33241 AC243732.1-201ENST00000612648 864 ntBASIC19.36■□□□□ 0.69
LSP1P33241 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
LSP1P33241 IRX1P1-201ENST00000438849 1838 ntBASIC19.36■□□□□ 0.69
LSP1P33241 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
LSP1P33241 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
LSP1P33241 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
LSP1P33241 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LSP1P33241 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
LSP1P33241 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.36■□□□□ 0.69
LSP1P33241 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LSP1P33241 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSP1P33241 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LSP1P33241 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
LSP1P33241 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.35■□□□□ 0.69
LSP1P33241 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.35■□□□□ 0.69
LSP1P33241 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSP1P33241 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LSP1P33241 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LSP1P33241 KRT8P20-201ENST00000423953 1409 ntBASIC19.35■□□□□ 0.69
LSP1P33241 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSP1P33241 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.35■□□□□ 0.69
LSP1P33241 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.35■□□□□ 0.69
LSP1P33241 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
LSP1P33241 TSPY26P-201ENST00000476365 1326 ntBASIC19.35■□□□□ 0.69
LSP1P33241 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSP1P33241 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSP1P33241 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSP1P33241 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSP1P33241 ANO7L1-203ENST00000602586 1720 ntBASIC19.35■□□□□ 0.69
LSP1P33241 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LSP1P33241 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSP1P33241 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSP1P33241 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.35■□□□□ 0.69
LSP1P33241 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.35■□□□□ 0.69
LSP1P33241 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.35■□□□□ 0.69
LSP1P33241 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSP1P33241 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LSP1P33241 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSP1P33241 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
LSP1P33241 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSP1P33241 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LSP1P33241 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.34■□□□□ 0.69
LSP1P33241 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.34■□□□□ 0.69
LSP1P33241 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LSP1P33241 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LSP1P33241 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LSP1P33241 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
LSP1P33241 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
LSP1P33241 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LSP1P33241 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LSP1P33241 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LSP1P33241 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.34■□□□□ 0.69
LSP1P33241 TPRG1LP1-201ENST00000598702 760 ntBASIC19.34■□□□□ 0.69
LSP1P33241 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LSP1P33241 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LSP1P33241 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LSP1P33241 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LSP1P33241 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
LSP1P33241 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.34■□□□□ 0.69
LSP1P33241 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LSP1P33241 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms