Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.79■■□□□ 1.08
CIITAP33076 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.79■■□□□ 1.08
CIITAP33076 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CIITAP33076 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CIITAP33076 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CIITAP33076 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CIITAP33076 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
CIITAP33076 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.78■■□□□ 1.08
CIITAP33076 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.78■■□□□ 1.08
CIITAP33076 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CIITAP33076 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.78■■□□□ 1.08
CIITAP33076 MMP23A-201ENST00000234610 1017 ntBASIC21.78■■□□□ 1.08
CIITAP33076 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CIITAP33076 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CIITAP33076 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CIITAP33076 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CIITAP33076 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CIITAP33076 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.78■■□□□ 1.08
CIITAP33076 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.78■■□□□ 1.08
CIITAP33076 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.78■■□□□ 1.08
CIITAP33076 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CIITAP33076 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.78■■□□□ 1.08
CIITAP33076 AC097488.1-201ENST00000507834 756 ntBASIC21.78■■□□□ 1.08
CIITAP33076 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.78■■□□□ 1.08
CIITAP33076 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.78■■□□□ 1.08
CIITAP33076 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
CIITAP33076 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.78■■□□□ 1.08
CIITAP33076 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CIITAP33076 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CIITAP33076 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CIITAP33076 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CIITAP33076 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CIITAP33076 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CIITAP33076 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CIITAP33076 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.77■■□□□ 1.08
CIITAP33076 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CIITAP33076 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.77■■□□□ 1.08
CIITAP33076 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CIITAP33076 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.77■■□□□ 1.08
CIITAP33076 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.77■■□□□ 1.08
CIITAP33076 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CIITAP33076 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CIITAP33076 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
CIITAP33076 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.77■■□□□ 1.08
CIITAP33076 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
CIITAP33076 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CIITAP33076 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.07
CIITAP33076 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.77■■□□□ 1.07
CIITAP33076 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
CIITAP33076 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CIITAP33076 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.76■■□□□ 1.07
CIITAP33076 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.76■■□□□ 1.07
CIITAP33076 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CIITAP33076 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CIITAP33076 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.76■■□□□ 1.07
CIITAP33076 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
CIITAP33076 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.76■■□□□ 1.07
CIITAP33076 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CIITAP33076 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.76■■□□□ 1.07
CIITAP33076 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CIITAP33076 MIR1238-201ENST00000408483 83 ntBASIC21.76■■□□□ 1.07
CIITAP33076 KRT8P11-201ENST00000409686 1436 ntBASIC21.76■■□□□ 1.07
CIITAP33076 AC087499.1-201ENST00000418141 1075 ntBASIC21.76■■□□□ 1.07
CIITAP33076 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.76■■□□□ 1.07
CIITAP33076 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.76■■□□□ 1.07
CIITAP33076 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CIITAP33076 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.76■■□□□ 1.07
CIITAP33076 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.76■■□□□ 1.07
CIITAP33076 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CIITAP33076 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.76■■□□□ 1.07
CIITAP33076 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CIITAP33076 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CIITAP33076 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CIITAP33076 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CIITAP33076 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CIITAP33076 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.75■■□□□ 1.07
CIITAP33076 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CIITAP33076 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CIITAP33076 KRT8P9-201ENST00000558927 1449 ntBASIC21.75■■□□□ 1.07
CIITAP33076 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CIITAP33076 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CIITAP33076 AL390955.1-201ENST00000428694 934 ntBASIC21.75■■□□□ 1.07
CIITAP33076 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CIITAP33076 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
CIITAP33076 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.75■■□□□ 1.07
CIITAP33076 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.75■■□□□ 1.07
CIITAP33076 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CIITAP33076 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CIITAP33076 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.75■■□□□ 1.07
CIITAP33076 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CIITAP33076 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CIITAP33076 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.75■■□□□ 1.07
CIITAP33076 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.75■■□□□ 1.07
CIITAP33076 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
CIITAP33076 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CIITAP33076 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
CIITAP33076 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CIITAP33076 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CIITAP33076 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CIITAP33076 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms