Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HOXA11P31270 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HOXA11P31270 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXA11P31270 TREX1-205ENST00000625293 1783 ntBASIC20.92■□□□□ 0.94
HOXA11P31270 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HOXA11P31270 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HOXA11P31270 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXA11P31270 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.92■□□□□ 0.94
HOXA11P31270 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.92■□□□□ 0.94
HOXA11P31270 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXA11P31270 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXA11P31270 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.92■□□□□ 0.94
HOXA11P31270 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.92■□□□□ 0.94
HOXA11P31270 KRT18P35-201ENST00000510488 1269 ntBASIC20.92■□□□□ 0.94
HOXA11P31270 PRSS44-201ENST00000515154 1146 ntBASIC20.92■□□□□ 0.94
HOXA11P31270 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
HOXA11P31270 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
HOXA11P31270 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HOXA11P31270 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.92■□□□□ 0.94
HOXA11P31270 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXA11P31270 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXA11P31270 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.92■□□□□ 0.94
HOXA11P31270 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.92■□□□□ 0.94
HOXA11P31270 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXA11P31270 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXA11P31270 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.92■□□□□ 0.94
HOXA11P31270 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXA11P31270 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
HOXA11P31270 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXA11P31270 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HOXA11P31270 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXA11P31270 ATP5G1P1-201ENST00000448724 379 ntBASIC20.91■□□□□ 0.94
HOXA11P31270 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.91■□□□□ 0.94
HOXA11P31270 DUX4L26-201ENST00000489078 1255 ntBASIC20.91■□□□□ 0.94
HOXA11P31270 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXA11P31270 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.91■□□□□ 0.94
HOXA11P31270 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.91■□□□□ 0.94
HOXA11P31270 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.91■□□□□ 0.94
HOXA11P31270 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXA11P31270 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.9■□□□□ 0.94
HOXA11P31270 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HOXA11P31270 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXA11P31270 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXA11P31270 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXA11P31270 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HOXA11P31270 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXA11P31270 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXA11P31270 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXA11P31270 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXA11P31270 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
HOXA11P31270 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.9■□□□□ 0.94
HOXA11P31270 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.9■□□□□ 0.94
HOXA11P31270 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HOXA11P31270 AL590326.2-201ENST00000625139 305 ntBASIC20.9■□□□□ 0.94
HOXA11P31270 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXA11P31270 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXA11P31270 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.9■□□□□ 0.94
HOXA11P31270 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
HOXA11P31270 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXA11P31270 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.9■□□□□ 0.94
HOXA11P31270 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXA11P31270 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HOXA11P31270 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.94
HOXA11P31270 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.89■□□□□ 0.94
HOXA11P31270 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
HOXA11P31270 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.89■□□□□ 0.94
HOXA11P31270 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.89■□□□□ 0.94
HOXA11P31270 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.89■□□□□ 0.94
HOXA11P31270 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
HOXA11P31270 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HOXA11P31270 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HOXA11P31270 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HOXA11P31270 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HOXA11P31270 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HOXA11P31270 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.88■□□□□ 0.93
HOXA11P31270 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
HOXA11P31270 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA11P31270 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.88■□□□□ 0.93
HOXA11P31270 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.88■□□□□ 0.93
HOXA11P31270 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA11P31270 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA11P31270 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA11P31270 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA11P31270 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA11P31270 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA11P31270 BX664615.1-201ENST00000443558 458 ntBASIC20.88■□□□□ 0.93
HOXA11P31270 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA11P31270 AP003041.3-201ENST00000527151 707 ntBASIC20.88■□□□□ 0.93
HOXA11P31270 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.88■□□□□ 0.93
HOXA11P31270 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA11P31270 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA11P31270 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA11P31270 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.88■□□□□ 0.93
HOXA11P31270 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.88■□□□□ 0.93
HOXA11P31270 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA11P31270 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.88■□□□□ 0.93
HOXA11P31270 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA11P31270 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.88■□□□□ 0.93
HOXA11P31270 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HOXA11P31270 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms