Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC30.7■■■□□ 2.51
CLIP1P30622 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC30.7■■■□□ 2.51
CLIP1P30622 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CLIP1P30622 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CLIP1P30622 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CLIP1P30622 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC30.7■■■□□ 2.5
CLIP1P30622 CLN6-221ENST00000637494 765 ntTSL 5 BASIC30.7■■■□□ 2.5
CLIP1P30622 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
CLIP1P30622 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
CLIP1P30622 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC30.69■■■□□ 2.5
CLIP1P30622 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CLIP1P30622 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CLIP1P30622 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC30.69■■■□□ 2.5
CLIP1P30622 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC30.69■■■□□ 2.5
CLIP1P30622 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
CLIP1P30622 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CLIP1P30622 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC30.69■■■□□ 2.5
CLIP1P30622 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC30.69■■■□□ 2.5
CLIP1P30622 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CLIP1P30622 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC30.69■■■□□ 2.5
CLIP1P30622 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC30.69■■■□□ 2.5
CLIP1P30622 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CLIP1P30622 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CLIP1P30622 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CLIP1P30622 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC30.69■■■□□ 2.5
CLIP1P30622 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CLIP1P30622 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
CLIP1P30622 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CLIP1P30622 AC007663.1-201ENST00000438948 1240 ntBASIC30.68■■■□□ 2.5
CLIP1P30622 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CLIP1P30622 Z82202.1-201ENST00000623446 1880 ntBASIC30.68■■■□□ 2.5
CLIP1P30622 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC30.68■■■□□ 2.5
CLIP1P30622 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CLIP1P30622 CA15P1-201ENST00000481698 905 ntBASIC30.67■■■□□ 2.5
CLIP1P30622 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
CLIP1P30622 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CLIP1P30622 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC30.67■■■□□ 2.5
CLIP1P30622 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC30.67■■■□□ 2.5
CLIP1P30622 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CLIP1P30622 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CLIP1P30622 TP73-202ENST00000354437 2140 ntTSL 5 BASIC30.67■■■□□ 2.5
CLIP1P30622 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
CLIP1P30622 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CLIP1P30622 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
CLIP1P30622 PCDHAC2-203ENST00000615316 3011 ntBASIC30.66■■■□□ 2.5
CLIP1P30622 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CLIP1P30622 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CLIP1P30622 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC30.66■■■□□ 2.5
CLIP1P30622 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC30.66■■■□□ 2.5
CLIP1P30622 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC30.66■■■□□ 2.5
CLIP1P30622 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
CLIP1P30622 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC30.66■■■□□ 2.5
CLIP1P30622 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC30.66■■■□□ 2.5
CLIP1P30622 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC30.66■■■□□ 2.5
CLIP1P30622 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CLIP1P30622 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC30.66■■■□□ 2.5
CLIP1P30622 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC30.66■■■□□ 2.5
CLIP1P30622 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
CLIP1P30622 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CLIP1P30622 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC30.65■■■□□ 2.5
CLIP1P30622 AC006011.2-201ENST00000621313 1158 ntBASIC30.65■■■□□ 2.5
CLIP1P30622 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CLIP1P30622 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CLIP1P30622 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC30.65■■■□□ 2.5
CLIP1P30622 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
CLIP1P30622 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
CLIP1P30622 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
CLIP1P30622 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC30.65■■■□□ 2.5
CLIP1P30622 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
CLIP1P30622 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CLIP1P30622 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CLIP1P30622 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CLIP1P30622 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC30.64■■■□□ 2.5
CLIP1P30622 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC30.64■■■□□ 2.5
CLIP1P30622 AC128688.1-201ENST00000487626 519 ntBASIC30.64■■■□□ 2.5
CLIP1P30622 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC30.64■■■□□ 2.5
CLIP1P30622 AC116562.4-202ENST00000641738 218 ntBASIC30.64■■■□□ 2.5
CLIP1P30622 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
CLIP1P30622 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC30.64■■■□□ 2.5
CLIP1P30622 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
CLIP1P30622 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CLIP1P30622 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CLIP1P30622 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.49
CLIP1P30622 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC30.64■■■□□ 2.49
CLIP1P30622 CCR12P-201ENST00000446203 998 ntBASIC30.64■■■□□ 2.49
CLIP1P30622 LTBR-211ENST00000543190 785 ntTSL 3 BASIC30.64■■■□□ 2.49
CLIP1P30622 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC30.64■■■□□ 2.49
CLIP1P30622 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
CLIP1P30622 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CLIP1P30622 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC30.63■■■□□ 2.49
CLIP1P30622 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CLIP1P30622 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC30.63■■■□□ 2.49
CLIP1P30622 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CLIP1P30622 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC30.63■■■□□ 2.49
CLIP1P30622 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CLIP1P30622 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC30.63■■■□□ 2.49
CLIP1P30622 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CLIP1P30622 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC30.63■■■□□ 2.49
CLIP1P30622 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC30.63■■■□□ 2.49
CLIP1P30622 BID-204ENST00000399767 2129 ntTSL 2 BASIC30.63■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms