Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.7■□□□□ 0.74
PTPN3P26045 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PTPN3P26045 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN3P26045 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN3P26045 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN3P26045 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.7■□□□□ 0.74
PTPN3P26045 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PTPN3P26045 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN3P26045 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN3P26045 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN3P26045 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN3P26045 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN3P26045 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
PTPN3P26045 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.69■□□□□ 0.74
PTPN3P26045 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN3P26045 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PTPN3P26045 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.69■□□□□ 0.74
PTPN3P26045 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN3P26045 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN3P26045 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PTPN3P26045 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PTPN3P26045 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN3P26045 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PTPN3P26045 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN3P26045 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN3P26045 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.69■□□□□ 0.74
PTPN3P26045 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN3P26045 KRT16P5-201ENST00000455284 522 ntBASIC19.69■□□□□ 0.74
PTPN3P26045 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN3P26045 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN3P26045 AC110285.5-201ENST00000611501 352 ntBASIC19.69■□□□□ 0.74
PTPN3P26045 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN3P26045 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN3P26045 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN3P26045 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN3P26045 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
PTPN3P26045 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN3P26045 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PTPN3P26045 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN3P26045 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.69■□□□□ 0.74
PTPN3P26045 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN3P26045 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.68■□□□□ 0.74
PTPN3P26045 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN3P26045 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN3P26045 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.68■□□□□ 0.74
PTPN3P26045 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN3P26045 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN3P26045 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.68■□□□□ 0.74
PTPN3P26045 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.68■□□□□ 0.74
PTPN3P26045 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PTPN3P26045 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN3P26045 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN3P26045 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PTPN3P26045 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.68■□□□□ 0.74
PTPN3P26045 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.68■□□□□ 0.74
PTPN3P26045 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.68■□□□□ 0.74
PTPN3P26045 TSPY20P-201ENST00000450910 630 ntBASIC19.68■□□□□ 0.74
PTPN3P26045 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PTPN3P26045 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.68■□□□□ 0.74
PTPN3P26045 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.68■□□□□ 0.74
PTPN3P26045 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.68■□□□□ 0.74
PTPN3P26045 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN3P26045 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PTPN3P26045 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN3P26045 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.68■□□□□ 0.74
PTPN3P26045 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.68■□□□□ 0.74
PTPN3P26045 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN3P26045 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN3P26045 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN3P26045 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PTPN3P26045 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN3P26045 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN3P26045 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PTPN3P26045 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.67■□□□□ 0.74
PTPN3P26045 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN3P26045 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN3P26045 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN3P26045 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.67■□□□□ 0.74
PTPN3P26045 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN3P26045 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.67■□□□□ 0.74
PTPN3P26045 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.67■□□□□ 0.74
PTPN3P26045 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.67■□□□□ 0.74
PTPN3P26045 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN3P26045 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.67■□□□□ 0.74
PTPN3P26045 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
PTPN3P26045 AL161938.1-201ENST00000569833 2180 ntBASIC19.67■□□□□ 0.74
PTPN3P26045 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN3P26045 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PTPN3P26045 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
PTPN3P26045 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN3P26045 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN3P26045 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.66■□□□□ 0.74
PTPN3P26045 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PTPN3P26045 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN3P26045 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN3P26045 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN3P26045 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN3P26045 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN3P26045 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PTPN3P26045 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms