Protein–RNA interactions for Protein: P20309

CHRM3, Muscarinic acetylcholine receptor M3, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM3P20309 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.21■□□□□ 0.67
CHRM3P20309 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRM3P20309 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHRM3P20309 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRM3P20309 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRM3P20309 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.2■□□□□ 0.66
CHRM3P20309 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRM3P20309 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRM3P20309 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRM3P20309 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CHRM3P20309 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHRM3P20309 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHRM3P20309 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.2■□□□□ 0.66
CHRM3P20309 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRM3P20309 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRM3P20309 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHRM3P20309 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRM3P20309 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRM3P20309 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
CHRM3P20309 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHRM3P20309 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.2■□□□□ 0.66
CHRM3P20309 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.2■□□□□ 0.66
CHRM3P20309 AC233263.1-201ENST00000578059 224 ntBASIC19.2■□□□□ 0.66
CHRM3P20309 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
CHRM3P20309 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRM3P20309 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRM3P20309 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRM3P20309 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRM3P20309 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHRM3P20309 ZNF815P-204ENST00000434898 1737 ntBASIC19.2■□□□□ 0.66
CHRM3P20309 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.19■□□□□ 0.66
CHRM3P20309 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHRM3P20309 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CHRM3P20309 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CHRM3P20309 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.19■□□□□ 0.66
CHRM3P20309 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CHRM3P20309 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
CHRM3P20309 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CHRM3P20309 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRM3P20309 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CHRM3P20309 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRM3P20309 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRM3P20309 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHRM3P20309 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.19■□□□□ 0.66
CHRM3P20309 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.19■□□□□ 0.66
CHRM3P20309 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.19■□□□□ 0.66
CHRM3P20309 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.19■□□□□ 0.66
CHRM3P20309 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.19■□□□□ 0.66
CHRM3P20309 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRM3P20309 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.19■□□□□ 0.66
CHRM3P20309 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRM3P20309 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.19■□□□□ 0.66
CHRM3P20309 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRM3P20309 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRM3P20309 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
CHRM3P20309 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRM3P20309 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
CHRM3P20309 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.19■□□□□ 0.66
CHRM3P20309 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRM3P20309 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
CHRM3P20309 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRM3P20309 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRM3P20309 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CHRM3P20309 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHRM3P20309 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRM3P20309 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.18■□□□□ 0.66
CHRM3P20309 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHRM3P20309 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRM3P20309 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRM3P20309 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.18■□□□□ 0.66
CHRM3P20309 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHRM3P20309 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHRM3P20309 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.18■□□□□ 0.66
CHRM3P20309 AC006058.3-201ENST00000606217 1069 ntBASIC19.18■□□□□ 0.66
CHRM3P20309 AC004264.1-201ENST00000608354 794 ntBASIC19.18■□□□□ 0.66
CHRM3P20309 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.18■□□□□ 0.66
CHRM3P20309 AL023875.1-201ENST00000640777 796 ntBASIC19.18■□□□□ 0.66
CHRM3P20309 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CHRM3P20309 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRM3P20309 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRM3P20309 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRM3P20309 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRM3P20309 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRM3P20309 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRM3P20309 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.17■□□□□ 0.66
CHRM3P20309 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.17■□□□□ 0.66
CHRM3P20309 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHRM3P20309 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CHRM3P20309 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.17■□□□□ 0.66
CHRM3P20309 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CHRM3P20309 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CHRM3P20309 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRM3P20309 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRM3P20309 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRM3P20309 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHRM3P20309 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CHRM3P20309 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHRM3P20309 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.17■□□□□ 0.66
CHRM3P20309 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHRM3P20309 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms