Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ERCC2P18074 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.88■□□□□ 0.77
ERCC2P18074 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ERCC2P18074 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ERCC2P18074 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
ERCC2P18074 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
ERCC2P18074 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ERCC2P18074 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.88■□□□□ 0.77
ERCC2P18074 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.88■□□□□ 0.77
ERCC2P18074 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
ERCC2P18074 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ERCC2P18074 NIFKP9-201ENST00000419265 221 ntBASIC19.88■□□□□ 0.77
ERCC2P18074 UBE2SP1-201ENST00000450587 669 ntBASIC19.88■□□□□ 0.77
ERCC2P18074 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ERCC2P18074 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.88■□□□□ 0.77
ERCC2P18074 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.88■□□□□ 0.77
ERCC2P18074 AL160286.2-201ENST00000567150 934 ntBASIC19.88■□□□□ 0.77
ERCC2P18074 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.88■□□□□ 0.77
ERCC2P18074 AL353708.3-201ENST00000610272 989 ntBASIC19.88■□□□□ 0.77
ERCC2P18074 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ERCC2P18074 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ERCC2P18074 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.88■□□□□ 0.77
ERCC2P18074 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ERCC2P18074 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ERCC2P18074 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ERCC2P18074 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.87■□□□□ 0.77
ERCC2P18074 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.87■□□□□ 0.77
ERCC2P18074 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ERCC2P18074 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ERCC2P18074 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
ERCC2P18074 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ERCC2P18074 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ERCC2P18074 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ERCC2P18074 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ERCC2P18074 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ERCC2P18074 RPS2P4-201ENST00000476944 856 ntBASIC19.87■□□□□ 0.77
ERCC2P18074 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ERCC2P18074 AP002982.1-201ENST00000492365 877 ntBASIC19.87■□□□□ 0.77
ERCC2P18074 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.87■□□□□ 0.77
ERCC2P18074 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ERCC2P18074 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.87■□□□□ 0.77
ERCC2P18074 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.87■□□□□ 0.77
ERCC2P18074 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.87■□□□□ 0.77
ERCC2P18074 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.87■□□□□ 0.77
ERCC2P18074 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.87■□□□□ 0.77
ERCC2P18074 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ERCC2P18074 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
ERCC2P18074 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ERCC2P18074 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ERCC2P18074 TEX21P-204ENST00000641479 1693 ntBASIC19.87■□□□□ 0.77
ERCC2P18074 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
ERCC2P18074 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
ERCC2P18074 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC2P18074 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC2P18074 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC2P18074 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.86■□□□□ 0.77
ERCC2P18074 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC2P18074 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC2P18074 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC2P18074 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
ERCC2P18074 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ERCC2P18074 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC2P18074 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC2P18074 AL353807.1-201ENST00000427475 662 ntBASIC19.86■□□□□ 0.77
ERCC2P18074 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.86■□□□□ 0.77
ERCC2P18074 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ERCC2P18074 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.86■□□□□ 0.77
ERCC2P18074 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.86■□□□□ 0.77
ERCC2P18074 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ERCC2P18074 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC2P18074 AL445675.2-201ENST00000620291 557 ntBASIC19.86■□□□□ 0.77
ERCC2P18074 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.86■□□□□ 0.77
ERCC2P18074 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.86■□□□□ 0.77
ERCC2P18074 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
ERCC2P18074 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.86■□□□□ 0.77
ERCC2P18074 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
ERCC2P18074 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC2P18074 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.86■□□□□ 0.77
ERCC2P18074 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC2P18074 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC2P18074 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC2P18074 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC2P18074 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.85■□□□□ 0.77
ERCC2P18074 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
ERCC2P18074 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC2P18074 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
ERCC2P18074 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.85■□□□□ 0.77
ERCC2P18074 AF186192.3-201ENST00000583427 947 ntBASIC19.85■□□□□ 0.77
ERCC2P18074 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.85■□□□□ 0.77
ERCC2P18074 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC2P18074 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
ERCC2P18074 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC2P18074 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC2P18074 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
ERCC2P18074 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC2P18074 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.85■□□□□ 0.77
ERCC2P18074 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC2P18074 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
ERCC2P18074 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC2P18074 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms