Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RARAP10276 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RARAP10276 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RARAP10276 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
RARAP10276 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RARAP10276 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RARAP10276 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RARAP10276 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RARAP10276 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RARAP10276 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.25■□□□□ 0.83
RARAP10276 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RARAP10276 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
RARAP10276 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RARAP10276 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
RARAP10276 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RARAP10276 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RARAP10276 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.25■□□□□ 0.83
RARAP10276 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RARAP10276 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RARAP10276 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RARAP10276 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RARAP10276 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RARAP10276 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RARAP10276 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
RARAP10276 AC026366.1-201ENST00000488803 879 ntBASIC20.25■□□□□ 0.83
RARAP10276 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.25■□□□□ 0.83
RARAP10276 KRT18P16-201ENST00000510337 1294 ntBASIC20.25■□□□□ 0.83
RARAP10276 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.25■□□□□ 0.83
RARAP10276 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.25■□□□□ 0.83
RARAP10276 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RARAP10276 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.25■□□□□ 0.83
RARAP10276 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RARAP10276 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RARAP10276 AL049812.1-201ENST00000432563 2267 ntBASIC20.25■□□□□ 0.83
RARAP10276 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.25■□□□□ 0.83
RARAP10276 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RARAP10276 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.25■□□□□ 0.83
RARAP10276 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.25■□□□□ 0.83
RARAP10276 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RARAP10276 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RARAP10276 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.24■□□□□ 0.83
RARAP10276 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RARAP10276 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
RARAP10276 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RARAP10276 AC120498.9-201ENST00000339021 3867 ntBASIC20.24■□□□□ 0.83
RARAP10276 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.24■□□□□ 0.83
RARAP10276 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.24■□□□□ 0.83
RARAP10276 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.24■□□□□ 0.83
RARAP10276 CROCCP3-202ENST00000420820 1947 ntBASIC20.24■□□□□ 0.83
RARAP10276 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RARAP10276 TEX21P-204ENST00000641479 1693 ntBASIC20.24■□□□□ 0.83
RARAP10276 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RARAP10276 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RARAP10276 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RARAP10276 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.24■□□□□ 0.83
RARAP10276 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.24■□□□□ 0.83
RARAP10276 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.24■□□□□ 0.83
RARAP10276 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.24■□□□□ 0.83
RARAP10276 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RARAP10276 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.24■□□□□ 0.83
RARAP10276 KRT8P8-201ENST00000434750 1448 ntBASIC20.24■□□□□ 0.83
RARAP10276 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RARAP10276 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RARAP10276 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.24■□□□□ 0.83
RARAP10276 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RARAP10276 ZNF815P-204ENST00000434898 1737 ntBASIC20.24■□□□□ 0.83
RARAP10276 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
RARAP10276 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RARAP10276 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
RARAP10276 NEFHP1-201ENST00000412845 2629 ntBASIC20.23■□□□□ 0.83
RARAP10276 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.23■□□□□ 0.83
RARAP10276 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RARAP10276 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RARAP10276 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RARAP10276 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RARAP10276 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.23■□□□□ 0.83
RARAP10276 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
RARAP10276 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RARAP10276 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
RARAP10276 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RARAP10276 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RARAP10276 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.23■□□□□ 0.83
RARAP10276 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.23■□□□□ 0.83
RARAP10276 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RARAP10276 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.23■□□□□ 0.83
RARAP10276 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RARAP10276 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RARAP10276 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.23■□□□□ 0.83
RARAP10276 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RARAP10276 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RARAP10276 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.23■□□□□ 0.83
RARAP10276 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.23■□□□□ 0.83
RARAP10276 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.23■□□□□ 0.83
RARAP10276 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RARAP10276 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RARAP10276 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
RARAP10276 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RARAP10276 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RARAP10276 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RARAP10276 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms