Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC24.63■■□□□ 1.53
SNRPA1P09661 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
SNRPA1P09661 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SNRPA1P09661 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC24.63■■□□□ 1.53
SNRPA1P09661 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SNRPA1P09661 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SNRPA1P09661 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SNRPA1P09661 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SNRPA1P09661 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC24.62■■□□□ 1.53
SNRPA1P09661 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SNRPA1P09661 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
SNRPA1P09661 AL031133.1-201ENST00000406807 723 ntBASIC24.62■■□□□ 1.53
SNRPA1P09661 ISCU-203ENST00000431221 799 ntTSL 2 BASIC24.62■■□□□ 1.53
SNRPA1P09661 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC24.62■■□□□ 1.53
SNRPA1P09661 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC24.62■■□□□ 1.53
SNRPA1P09661 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC24.62■■□□□ 1.53
SNRPA1P09661 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC24.62■■□□□ 1.53
SNRPA1P09661 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC24.62■■□□□ 1.53
SNRPA1P09661 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC24.62■■□□□ 1.53
SNRPA1P09661 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SNRPA1P09661 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
SNRPA1P09661 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
SNRPA1P09661 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SNRPA1P09661 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
SNRPA1P09661 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SNRPA1P09661 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SNRPA1P09661 PHB2-202ENST00000440277 996 ntTSL 5 BASIC24.61■■□□□ 1.53
SNRPA1P09661 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC24.61■■□□□ 1.53
SNRPA1P09661 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC24.61■■□□□ 1.53
SNRPA1P09661 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC24.61■■□□□ 1.53
SNRPA1P09661 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SNRPA1P09661 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC24.61■■□□□ 1.53
SNRPA1P09661 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SNRPA1P09661 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC24.61■■□□□ 1.53
SNRPA1P09661 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
SNRPA1P09661 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
SNRPA1P09661 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SNRPA1P09661 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC24.61■■□□□ 1.53
SNRPA1P09661 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC24.61■■□□□ 1.53
SNRPA1P09661 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
SNRPA1P09661 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC24.61■■□□□ 1.53
SNRPA1P09661 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SNRPA1P09661 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SNRPA1P09661 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
SNRPA1P09661 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
SNRPA1P09661 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
SNRPA1P09661 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SNRPA1P09661 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC24.6■■□□□ 1.53
SNRPA1P09661 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SNRPA1P09661 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SNRPA1P09661 AC092647.4-201ENST00000457211 535 ntBASIC24.6■■□□□ 1.53
SNRPA1P09661 AL441883.1-201ENST00000566170 1045 ntBASIC24.6■■□□□ 1.53
SNRPA1P09661 AL023973.1-201ENST00000624619 620 ntBASIC24.6■■□□□ 1.53
SNRPA1P09661 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SNRPA1P09661 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC24.6■■□□□ 1.53
SNRPA1P09661 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC24.6■■□□□ 1.53
SNRPA1P09661 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
SNRPA1P09661 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC24.6■■□□□ 1.53
SNRPA1P09661 AC112907.3-201ENST00000577781 2400 ntBASIC24.6■■□□□ 1.53
SNRPA1P09661 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
SNRPA1P09661 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SNRPA1P09661 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SNRPA1P09661 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
SNRPA1P09661 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC24.59■■□□□ 1.53
SNRPA1P09661 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
SNRPA1P09661 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC24.59■■□□□ 1.53
SNRPA1P09661 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SNRPA1P09661 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC24.59■■□□□ 1.53
SNRPA1P09661 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC24.59■■□□□ 1.53
SNRPA1P09661 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SNRPA1P09661 CLN6-204ENST00000564752 900 ntTSL 3 BASIC24.59■■□□□ 1.53
SNRPA1P09661 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
SNRPA1P09661 AC140113.3-201ENST00000605663 199 ntBASIC24.59■■□□□ 1.53
SNRPA1P09661 AL358472.4-201ENST00000633140 710 ntBASIC24.59■■□□□ 1.53
SNRPA1P09661 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
SNRPA1P09661 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC24.59■■□□□ 1.53
SNRPA1P09661 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC24.59■■□□□ 1.53
SNRPA1P09661 MED17-221ENST00000639724 2317 ntTSL 5 BASIC24.59■■□□□ 1.53
SNRPA1P09661 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC24.59■■□□□ 1.53
SNRPA1P09661 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
SNRPA1P09661 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SNRPA1P09661 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SNRPA1P09661 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC24.59■■□□□ 1.53
SNRPA1P09661 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SNRPA1P09661 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC24.58■■□□□ 1.53
SNRPA1P09661 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SNRPA1P09661 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SNRPA1P09661 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.53
SNRPA1P09661 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SNRPA1P09661 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
SNRPA1P09661 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
SNRPA1P09661 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SNRPA1P09661 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
SNRPA1P09661 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC24.58■■□□□ 1.53
SNRPA1P09661 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC24.58■■□□□ 1.53
SNRPA1P09661 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC24.58■■□□□ 1.53
SNRPA1P09661 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC24.58■■□□□ 1.53
SNRPA1P09661 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
SNRPA1P09661 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC24.58■■□□□ 1.53
SNRPA1P09661 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC24.58■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms