Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TPM3P06753 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TPM3P06753 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC21.64■■□□□ 1.05
TPM3P06753 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.64■■□□□ 1.05
TPM3P06753 HTR7P1-202ENST00000624664 4411 ntBASIC21.64■■□□□ 1.05
TPM3P06753 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TPM3P06753 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.64■■□□□ 1.05
TPM3P06753 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
TPM3P06753 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TPM3P06753 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TPM3P06753 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TPM3P06753 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.63■■□□□ 1.05
TPM3P06753 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TPM3P06753 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.63■■□□□ 1.05
TPM3P06753 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
TPM3P06753 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TPM3P06753 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.63■■□□□ 1.05
TPM3P06753 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TPM3P06753 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TPM3P06753 AC016405.3-201ENST00000607710 860 ntBASIC21.63■■□□□ 1.05
TPM3P06753 AC105020.6-201ENST00000621523 1217 ntBASIC21.63■■□□□ 1.05
TPM3P06753 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TPM3P06753 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TPM3P06753 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC21.63■■□□□ 1.05
TPM3P06753 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC21.63■■□□□ 1.05
TPM3P06753 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
TPM3P06753 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TPM3P06753 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.63■■□□□ 1.05
TPM3P06753 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
TPM3P06753 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TPM3P06753 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
TPM3P06753 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
TPM3P06753 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TPM3P06753 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TPM3P06753 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TPM3P06753 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TPM3P06753 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TPM3P06753 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TPM3P06753 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TPM3P06753 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TPM3P06753 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TPM3P06753 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TPM3P06753 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TPM3P06753 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TPM3P06753 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.62■■□□□ 1.05
TPM3P06753 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TPM3P06753 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.62■■□□□ 1.05
TPM3P06753 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.62■■□□□ 1.05
TPM3P06753 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
TPM3P06753 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TPM3P06753 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TPM3P06753 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.62■■□□□ 1.05
TPM3P06753 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TPM3P06753 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
TPM3P06753 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TPM3P06753 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TPM3P06753 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
TPM3P06753 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
TPM3P06753 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TPM3P06753 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.61■■□□□ 1.05
TPM3P06753 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
TPM3P06753 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TPM3P06753 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
TPM3P06753 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TPM3P06753 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TPM3P06753 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TPM3P06753 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
TPM3P06753 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
TPM3P06753 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC21.61■■□□□ 1.05
TPM3P06753 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TPM3P06753 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TPM3P06753 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TPM3P06753 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
TPM3P06753 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TPM3P06753 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.61■■□□□ 1.05
TPM3P06753 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TPM3P06753 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.61■■□□□ 1.05
TPM3P06753 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TPM3P06753 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TPM3P06753 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TPM3P06753 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
TPM3P06753 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TPM3P06753 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TPM3P06753 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
TPM3P06753 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TPM3P06753 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TPM3P06753 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC21.6■■□□□ 1.05
TPM3P06753 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
TPM3P06753 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.6■■□□□ 1.05
TPM3P06753 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.6■■□□□ 1.05
TPM3P06753 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TPM3P06753 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TPM3P06753 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TPM3P06753 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TPM3P06753 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.6■■□□□ 1.05
TPM3P06753 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.6■■□□□ 1.05
TPM3P06753 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TPM3P06753 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC21.6■■□□□ 1.05
TPM3P06753 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TPM3P06753 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms