Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.2■□□□□ 0.5
MT-ND1P03886 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
MT-ND1P03886 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.2■□□□□ 0.5
MT-ND1P03886 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.2■□□□□ 0.5
MT-ND1P03886 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.2■□□□□ 0.5
MT-ND1P03886 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-ND1P03886 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MT-ND1P03886 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MT-ND1P03886 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-ND1P03886 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.2■□□□□ 0.5
MT-ND1P03886 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.2■□□□□ 0.5
MT-ND1P03886 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MT-ND1P03886 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.2■□□□□ 0.5
MT-ND1P03886 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-ND1P03886 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-ND1P03886 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
MT-ND1P03886 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
MT-ND1P03886 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-ND1P03886 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MT-ND1P03886 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND1P03886 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND1P03886 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.19■□□□□ 0.5
MT-ND1P03886 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.19■□□□□ 0.5
MT-ND1P03886 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND1P03886 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND1P03886 AC141586.3-201ENST00000562166 1838 ntBASIC18.19■□□□□ 0.5
MT-ND1P03886 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.19■□□□□ 0.5
MT-ND1P03886 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND1P03886 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND1P03886 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND1P03886 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND1P03886 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
MT-ND1P03886 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND1P03886 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND1P03886 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND1P03886 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND1P03886 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.19■□□□□ 0.5
MT-ND1P03886 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.19■□□□□ 0.5
MT-ND1P03886 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND1P03886 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.19■□□□□ 0.5
MT-ND1P03886 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.19■□□□□ 0.5
MT-ND1P03886 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND1P03886 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.19■□□□□ 0.5
MT-ND1P03886 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND1P03886 BID-214ENST00000617586 542 ntTSL 5 BASIC18.19■□□□□ 0.5
MT-ND1P03886 PCDHB18P-201ENST00000524813 2368 ntBASIC18.19■□□□□ 0.5
MT-ND1P03886 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND1P03886 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
MT-ND1P03886 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
MT-ND1P03886 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND1P03886 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.19■□□□□ 0.5
MT-ND1P03886 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.19■□□□□ 0.5
MT-ND1P03886 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MT-ND1P03886 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
MT-ND1P03886 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
MT-ND1P03886 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
MT-ND1P03886 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MT-ND1P03886 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.18■□□□□ 0.5
MT-ND1P03886 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-ND1P03886 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
MT-ND1P03886 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-ND1P03886 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-ND1P03886 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
MT-ND1P03886 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-ND1P03886 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-ND1P03886 HLA-G-202ENST00000376815 851 ntBASIC18.18■□□□□ 0.5
MT-ND1P03886 HLA-G-203ENST00000376818 1127 ntBASIC18.18■□□□□ 0.5
MT-ND1P03886 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.18■□□□□ 0.5
MT-ND1P03886 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.18■□□□□ 0.5
MT-ND1P03886 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-ND1P03886 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.18■□□□□ 0.5
MT-ND1P03886 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-ND1P03886 AC069236.1-201ENST00000604339 616 ntBASIC18.18■□□□□ 0.5
MT-ND1P03886 AC105020.6-201ENST00000621523 1217 ntBASIC18.18■□□□□ 0.5
MT-ND1P03886 AC231657.2-201ENST00000624556 255 ntBASIC18.18■□□□□ 0.5
MT-ND1P03886 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
MT-ND1P03886 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.18■□□□□ 0.5
MT-ND1P03886 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-ND1P03886 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MT-ND1P03886 FP475955.4-201ENST00000623131 1990 ntBASIC18.18■□□□□ 0.5
MT-ND1P03886 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-ND1P03886 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.18■□□□□ 0.5
MT-ND1P03886 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-ND1P03886 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-ND1P03886 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-ND1P03886 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-ND1P03886 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-ND1P03886 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-ND1P03886 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-ND1P03886 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.18■□□□□ 0.5
MT-ND1P03886 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-ND1P03886 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.18■□□□□ 0.5
MT-ND1P03886 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-ND1P03886 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.17■□□□□ 0.5
MT-ND1P03886 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
MT-ND1P03886 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MT-ND1P03886 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MT-ND1P03886 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.17■□□□□ 0.5
MT-ND1P03886 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
MT-ND1P03886 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms