Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AC066615.1-201ENST00000640911 628 ntBASIC18.49■□□□□ 0.55
LCMT2O60294 AL049637.2-201ENST00000641778 930 ntBASIC18.49■□□□□ 0.55
LCMT2O60294 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LCMT2O60294 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LCMT2O60294 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.49■□□□□ 0.55
LCMT2O60294 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
LCMT2O60294 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.49■□□□□ 0.55
LCMT2O60294 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LCMT2O60294 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LCMT2O60294 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
LCMT2O60294 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
LCMT2O60294 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LCMT2O60294 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LCMT2O60294 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.48■□□□□ 0.55
LCMT2O60294 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.48■□□□□ 0.55
LCMT2O60294 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.48■□□□□ 0.55
LCMT2O60294 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.48■□□□□ 0.55
LCMT2O60294 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.48■□□□□ 0.55
LCMT2O60294 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LCMT2O60294 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LCMT2O60294 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.48■□□□□ 0.55
LCMT2O60294 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.48■□□□□ 0.55
LCMT2O60294 AC004980.1-204ENST00000429707 299 ntBASIC18.48■□□□□ 0.55
LCMT2O60294 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.48■□□□□ 0.55
LCMT2O60294 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LCMT2O60294 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LCMT2O60294 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.48■□□□□ 0.55
LCMT2O60294 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
LCMT2O60294 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LCMT2O60294 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
LCMT2O60294 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.48■□□□□ 0.55
LCMT2O60294 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LCMT2O60294 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.48■□□□□ 0.55
LCMT2O60294 KRT16P1-201ENST00000399124 1418 ntBASIC18.48■□□□□ 0.55
LCMT2O60294 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
LCMT2O60294 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
LCMT2O60294 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
LCMT2O60294 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCMT2O60294 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCMT2O60294 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCMT2O60294 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LCMT2O60294 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCMT2O60294 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LCMT2O60294 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCMT2O60294 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCMT2O60294 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCMT2O60294 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCMT2O60294 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCMT2O60294 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
LCMT2O60294 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.47■□□□□ 0.55
LCMT2O60294 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.47■□□□□ 0.55
LCMT2O60294 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCMT2O60294 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LCMT2O60294 CD177P1-201ENST00000606252 935 ntBASIC18.47■□□□□ 0.55
LCMT2O60294 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LCMT2O60294 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
LCMT2O60294 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.47■□□□□ 0.55
LCMT2O60294 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.47■□□□□ 0.55
LCMT2O60294 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCMT2O60294 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.47■□□□□ 0.55
LCMT2O60294 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LCMT2O60294 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.47■□□□□ 0.55
LCMT2O60294 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCMT2O60294 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LCMT2O60294 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.46■□□□□ 0.55
LCMT2O60294 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LCMT2O60294 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCMT2O60294 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.46■□□□□ 0.55
LCMT2O60294 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.46■□□□□ 0.55
LCMT2O60294 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCMT2O60294 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCMT2O60294 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.46■□□□□ 0.55
LCMT2O60294 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.46■□□□□ 0.55
LCMT2O60294 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.46■□□□□ 0.55
LCMT2O60294 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.46■□□□□ 0.55
LCMT2O60294 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.46■□□□□ 0.55
LCMT2O60294 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.46■□□□□ 0.55
LCMT2O60294 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.46■□□□□ 0.55
LCMT2O60294 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.46■□□□□ 0.55
LCMT2O60294 AC131212.4-201ENST00000623606 975 ntBASIC18.46■□□□□ 0.55
LCMT2O60294 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.46■□□□□ 0.55
LCMT2O60294 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.46■□□□□ 0.55
LCMT2O60294 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCMT2O60294 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.46■□□□□ 0.55
LCMT2O60294 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCMT2O60294 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCMT2O60294 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCMT2O60294 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCMT2O60294 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCMT2O60294 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
LCMT2O60294 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
LCMT2O60294 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
LCMT2O60294 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.46■□□□□ 0.55
LCMT2O60294 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
LCMT2O60294 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LCMT2O60294 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.46■□□□□ 0.55
LCMT2O60294 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.46■□□□□ 0.54
LCMT2O60294 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
LCMT2O60294 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LCMT2O60294 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms