Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.67■□□□□ 0.26
PHF1O43189 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.67■□□□□ 0.26
PHF1O43189 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PHF1O43189 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PHF1O43189 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PHF1O43189 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.67■□□□□ 0.26
PHF1O43189 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PHF1O43189 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.67■□□□□ 0.26
PHF1O43189 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PHF1O43189 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHF1O43189 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.66■□□□□ 0.26
PHF1O43189 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHF1O43189 AC090340.1-201ENST00000620778 4980 ntBASIC16.66■□□□□ 0.26
PHF1O43189 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PHF1O43189 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHF1O43189 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHF1O43189 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHF1O43189 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHF1O43189 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHF1O43189 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHF1O43189 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHF1O43189 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHF1O43189 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.66■□□□□ 0.26
PHF1O43189 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.66■□□□□ 0.26
PHF1O43189 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.66■□□□□ 0.26
PHF1O43189 PRKY-204ENST00000533551 1019 ntBASIC16.66■□□□□ 0.26
PHF1O43189 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.66■□□□□ 0.26
PHF1O43189 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHF1O43189 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.66■□□□□ 0.26
PHF1O43189 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PHF1O43189 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.66■□□□□ 0.26
PHF1O43189 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHF1O43189 AC120498.8-201ENST00000614275 531 ntBASIC16.66■□□□□ 0.26
PHF1O43189 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PHF1O43189 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PHF1O43189 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PHF1O43189 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHF1O43189 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PHF1O43189 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.66■□□□□ 0.26
PHF1O43189 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
PHF1O43189 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PHF1O43189 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.66■□□□□ 0.26
PHF1O43189 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.66■□□□□ 0.26
PHF1O43189 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PHF1O43189 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.65■□□□□ 0.26
PHF1O43189 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHF1O43189 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.65■□□□□ 0.26
PHF1O43189 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHF1O43189 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHF1O43189 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PHF1O43189 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHF1O43189 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.65■□□□□ 0.26
PHF1O43189 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PHF1O43189 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHF1O43189 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHF1O43189 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHF1O43189 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PHF1O43189 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PHF1O43189 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHF1O43189 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.65■□□□□ 0.26
PHF1O43189 AL355075.4-201ENST00000554988 638 ntBASIC16.65■□□□□ 0.26
PHF1O43189 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.65■□□□□ 0.26
PHF1O43189 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.65■□□□□ 0.26
PHF1O43189 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.65■□□□□ 0.26
PHF1O43189 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.65■□□□□ 0.26
PHF1O43189 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.65■□□□□ 0.26
PHF1O43189 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHF1O43189 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHF1O43189 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PHF1O43189 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.65■□□□□ 0.26
PHF1O43189 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHF1O43189 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
PHF1O43189 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PHF1O43189 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PHF1O43189 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.65■□□□□ 0.26
PHF1O43189 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PHF1O43189 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
PHF1O43189 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHF1O43189 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHF1O43189 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.64■□□□□ 0.25
PHF1O43189 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHF1O43189 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PHF1O43189 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
PHF1O43189 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PHF1O43189 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHF1O43189 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.64■□□□□ 0.25
PHF1O43189 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PHF1O43189 TMEM179-206ENST00000616017 1645 ntBASIC16.64■□□□□ 0.25
PHF1O43189 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHF1O43189 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.64■□□□□ 0.25
PHF1O43189 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
PHF1O43189 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.64■□□□□ 0.25
PHF1O43189 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHF1O43189 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
PHF1O43189 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.64■□□□□ 0.25
PHF1O43189 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PHF1O43189 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.64■□□□□ 0.25
PHF1O43189 DPP3P2-201ENST00000416030 1696 ntBASIC16.64■□□□□ 0.25
PHF1O43189 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PHF1O43189 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms