Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
O00370 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
O00370 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.59■□□□□ 0.89
O00370 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.59■□□□□ 0.89
O00370 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.59■□□□□ 0.89
O00370 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
O00370 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
O00370 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
O00370 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
O00370 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
O00370 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
O00370 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
O00370 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
O00370 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
O00370 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
O00370 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
O00370 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.58■□□□□ 0.89
O00370 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.58■□□□□ 0.89
O00370 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
O00370 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.58■□□□□ 0.89
O00370 AC098818.2-201ENST00000564925 2320 ntBASIC20.58■□□□□ 0.89
O00370 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
O00370 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
O00370 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
O00370 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
O00370 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
O00370 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
O00370 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.58■□□□□ 0.89
O00370 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.58■□□□□ 0.89
O00370 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.58■□□□□ 0.89
O00370 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.58■□□□□ 0.89
O00370 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.58■□□□□ 0.89
O00370 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.58■□□□□ 0.89
O00370 AL353708.3-201ENST00000610272 989 ntBASIC20.58■□□□□ 0.89
O00370 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
O00370 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
O00370 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
O00370 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.58■□□□□ 0.88
O00370 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
O00370 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
O00370 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
O00370 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
O00370 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
O00370 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.58■□□□□ 0.88
O00370 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
O00370 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
O00370 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
O00370 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
O00370 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
O00370 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.57■□□□□ 0.88
O00370 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
O00370 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
O00370 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
O00370 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
O00370 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.57■□□□□ 0.88
O00370 NIFKP9-201ENST00000419265 221 ntBASIC20.57■□□□□ 0.88
O00370 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.57■□□□□ 0.88
O00370 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
O00370 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.57■□□□□ 0.88
O00370 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.57■□□□□ 0.88
O00370 AF186192.3-201ENST00000583427 947 ntBASIC20.57■□□□□ 0.88
O00370 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.57■□□□□ 0.88
O00370 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
O00370 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.57■□□□□ 0.88
O00370 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.57■□□□□ 0.88
O00370 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
O00370 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
O00370 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
O00370 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.56■□□□□ 0.88
O00370 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.56■□□□□ 0.88
O00370 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
O00370 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.56■□□□□ 0.88
O00370 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
O00370 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
O00370 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
O00370 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
O00370 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.56■□□□□ 0.88
O00370 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.56■□□□□ 0.88
O00370 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.56■□□□□ 0.88
O00370 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.56■□□□□ 0.88
O00370 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.56■□□□□ 0.88
O00370 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
O00370 AC104417.2-201ENST00000562989 1793 ntBASIC20.56■□□□□ 0.88
O00370 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
O00370 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
O00370 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
O00370 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
O00370 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
O00370 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
O00370 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
O00370 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
O00370 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.55■□□□□ 0.88
O00370 LINC01465-201ENST00000408887 1940 ntBASIC20.55■□□□□ 0.88
O00370 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
O00370 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
O00370 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
O00370 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.55■□□□□ 0.88
O00370 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
O00370 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
O00370 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms