Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.18■□□□□ 0.5
C1QTNF9BB2RNN3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 MIR564-202ENST00000385049 94 ntBASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 AC005104.2-201ENST00000427818 678 ntBASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 DRAXINP1-201ENST00000437611 948 ntBASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 AP001005.1-201ENST00000571755 1248 ntBASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 AC138894.3-201ENST00000603787 634 ntBASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 AL691403.2-201ENST00000618460 490 ntBASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
C1QTNF9BB2RNN3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
C1QTNF9BB2RNN3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C1QTNF9BB2RNN3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
C1QTNF9BB2RNN3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.16■□□□□ 0.5
C1QTNF9BB2RNN3 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C1QTNF9BB2RNN3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C1QTNF9BB2RNN3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
C1QTNF9BB2RNN3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C1QTNF9BB2RNN3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
C1QTNF9BB2RNN3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
C1QTNF9BB2RNN3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.16■□□□□ 0.5
C1QTNF9BB2RNN3 TOB2P1-201ENST00000469761 992 ntBASIC18.16■□□□□ 0.5
C1QTNF9BB2RNN3 AC034232.1-201ENST00000506026 1064 ntBASIC18.16■□□□□ 0.5
C1QTNF9BB2RNN3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.16■□□□□ 0.5
C1QTNF9BB2RNN3 AC027796.2-201ENST00000575326 344 ntBASIC18.16■□□□□ 0.5
C1QTNF9BB2RNN3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.16■□□□□ 0.5
C1QTNF9BB2RNN3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C1QTNF9BB2RNN3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
C1QTNF9BB2RNN3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C1QTNF9BB2RNN3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.16■□□□□ 0.5
C1QTNF9BB2RNN3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
C1QTNF9BB2RNN3 PMS2P7-201ENST00000506558 1336 ntBASIC18.16■□□□□ 0.5
C1QTNF9BB2RNN3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.16■□□□□ 0.5
C1QTNF9BB2RNN3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C1QTNF9BB2RNN3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
C1QTNF9BB2RNN3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
C1QTNF9BB2RNN3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
C1QTNF9BB2RNN3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
C1QTNF9BB2RNN3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C1QTNF9BB2RNN3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.15■□□□□ 0.5
C1QTNF9BB2RNN3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
C1QTNF9BB2RNN3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.15■□□□□ 0.5
C1QTNF9BB2RNN3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
C1QTNF9BB2RNN3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
C1QTNF9BB2RNN3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.15■□□□□ 0.5
C1QTNF9BB2RNN3 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C1QTNF9BB2RNN3 PMS2P2-201ENST00000425039 1128 ntBASIC18.15■□□□□ 0.5
C1QTNF9BB2RNN3 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.15■□□□□ 0.5
C1QTNF9BB2RNN3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.15■□□□□ 0.5
C1QTNF9BB2RNN3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.15■□□□□ 0.5
C1QTNF9BB2RNN3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.15■□□□□ 0.5
C1QTNF9BB2RNN3 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.15■□□□□ 0.5
C1QTNF9BB2RNN3 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.15■□□□□ 0.5
C1QTNF9BB2RNN3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.15■□□□□ 0.5
C1QTNF9BB2RNN3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.15■□□□□ 0.5
C1QTNF9BB2RNN3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.15■□□□□ 0.5
C1QTNF9BB2RNN3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.15■□□□□ 0.5
C1QTNF9BB2RNN3 AL162741.1-201ENST00000565563 1558 ntBASIC18.15■□□□□ 0.5
C1QTNF9BB2RNN3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C1QTNF9BB2RNN3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
C1QTNF9BB2RNN3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
C1QTNF9BB2RNN3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.15■□□□□ 0.5
C1QTNF9BB2RNN3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
C1QTNF9BB2RNN3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C1QTNF9BB2RNN3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C1QTNF9BB2RNN3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
C1QTNF9BB2RNN3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
C1QTNF9BB2RNN3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
C1QTNF9BB2RNN3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
C1QTNF9BB2RNN3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
C1QTNF9BB2RNN3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms