Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.9□□□□□ -0.02
COLCA2A8K830 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COLCA2A8K830 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
COLCA2A8K830 TEX21P-204ENST00000641479 1693 ntBASIC14.9□□□□□ -0.02
COLCA2A8K830 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.9□□□□□ -0.02
COLCA2A8K830 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
COLCA2A8K830 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
COLCA2A8K830 AC092850.2-201ENST00000623821 2697 ntBASIC14.89□□□□□ -0.03
COLCA2A8K830 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
COLCA2A8K830 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
COLCA2A8K830 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.89□□□□□ -0.03
COLCA2A8K830 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COLCA2A8K830 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COLCA2A8K830 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COLCA2A8K830 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COLCA2A8K830 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COLCA2A8K830 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COLCA2A8K830 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COLCA2A8K830 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COLCA2A8K830 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
COLCA2A8K830 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COLCA2A8K830 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COLCA2A8K830 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
COLCA2A8K830 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COLCA2A8K830 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COLCA2A8K830 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COLCA2A8K830 MIR6765-201ENST00000614092 87 ntBASIC14.89□□□□□ -0.03
COLCA2A8K830 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
COLCA2A8K830 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COLCA2A8K830 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COLCA2A8K830 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COLCA2A8K830 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.89□□□□□ -0.03
COLCA2A8K830 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
COLCA2A8K830 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.89□□□□□ -0.03
COLCA2A8K830 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
COLCA2A8K830 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
COLCA2A8K830 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
COLCA2A8K830 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
COLCA2A8K830 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
COLCA2A8K830 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
COLCA2A8K830 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COLCA2A8K830 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
COLCA2A8K830 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COLCA2A8K830 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COLCA2A8K830 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
COLCA2A8K830 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
COLCA2A8K830 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.88□□□□□ -0.03
COLCA2A8K830 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
COLCA2A8K830 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COLCA2A8K830 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.88□□□□□ -0.03
COLCA2A8K830 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COLCA2A8K830 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COLCA2A8K830 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.88□□□□□ -0.03
COLCA2A8K830 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COLCA2A8K830 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.88□□□□□ -0.03
COLCA2A8K830 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
COLCA2A8K830 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
COLCA2A8K830 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
COLCA2A8K830 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COLCA2A8K830 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC14.88□□□□□ -0.03
COLCA2A8K830 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC14.88□□□□□ -0.03
COLCA2A8K830 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COLCA2A8K830 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC14.88□□□□□ -0.03
COLCA2A8K830 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COLCA2A8K830 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.88□□□□□ -0.03
COLCA2A8K830 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COLCA2A8K830 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COLCA2A8K830 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
COLCA2A8K830 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
COLCA2A8K830 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COLCA2A8K830 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC14.88□□□□□ -0.03
COLCA2A8K830 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
COLCA2A8K830 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
COLCA2A8K830 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COLCA2A8K830 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COLCA2A8K830 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COLCA2A8K830 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.87□□□□□ -0.03
COLCA2A8K830 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COLCA2A8K830 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC14.87□□□□□ -0.03
COLCA2A8K830 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COLCA2A8K830 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
COLCA2A8K830 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.87□□□□□ -0.03
COLCA2A8K830 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
COLCA2A8K830 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.87□□□□□ -0.03
COLCA2A8K830 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC14.87□□□□□ -0.03
COLCA2A8K830 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COLCA2A8K830 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
COLCA2A8K830 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
COLCA2A8K830 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
COLCA2A8K830 SLC25A6P5-201ENST00000435663 894 ntBASIC14.87□□□□□ -0.03
COLCA2A8K830 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
COLCA2A8K830 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC14.87□□□□□ -0.03
COLCA2A8K830 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC14.87□□□□□ -0.03
COLCA2A8K830 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC14.87□□□□□ -0.03
COLCA2A8K830 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
COLCA2A8K830 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.87□□□□□ -0.03
COLCA2A8K830 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC14.87□□□□□ -0.03
COLCA2A8K830 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
COLCA2A8K830 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
COLCA2A8K830 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms