Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC01548A6NM66 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC01548A6NM66 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC01548A6NM66 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LINC01548A6NM66 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.25■□□□□ 0.03
LINC01548A6NM66 MESTP1-201ENST00000404287 994 ntBASIC15.25■□□□□ 0.03
LINC01548A6NM66 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC15.25■□□□□ 0.03
LINC01548A6NM66 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC01548A6NM66 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.25■□□□□ 0.03
LINC01548A6NM66 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.25■□□□□ 0.03
LINC01548A6NM66 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LINC01548A6NM66 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC01548A6NM66 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC15.25■□□□□ 0.03
LINC01548A6NM66 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC01548A6NM66 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LINC01548A6NM66 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC15.25■□□□□ 0.03
LINC01548A6NM66 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC01548A6NM66 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.25■□□□□ 0.03
LINC01548A6NM66 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC01548A6NM66 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC15.24■□□□□ 0.03
LINC01548A6NM66 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC01548A6NM66 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC01548A6NM66 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC01548A6NM66 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
LINC01548A6NM66 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC01548A6NM66 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC01548A6NM66 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LINC01548A6NM66 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC01548A6NM66 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINC01548A6NM66 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINC01548A6NM66 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC01548A6NM66 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC01548A6NM66 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINC01548A6NM66 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
LINC01548A6NM66 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC01548A6NM66 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.24■□□□□ 0.03
LINC01548A6NM66 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.24■□□□□ 0.03
LINC01548A6NM66 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.24■□□□□ 0.03
LINC01548A6NM66 Z85996.1-201ENST00000494644 937 ntBASIC15.24■□□□□ 0.03
LINC01548A6NM66 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.24■□□□□ 0.03
LINC01548A6NM66 AC116562.2-201ENST00000507042 360 ntBASIC15.24■□□□□ 0.03
LINC01548A6NM66 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC01548A6NM66 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.24■□□□□ 0.03
LINC01548A6NM66 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.24■□□□□ 0.03
LINC01548A6NM66 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.24■□□□□ 0.03
LINC01548A6NM66 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC01548A6NM66 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.24■□□□□ 0.03
LINC01548A6NM66 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC01548A6NM66 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC01548A6NM66 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC01548A6NM66 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC01548A6NM66 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINC01548A6NM66 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINC01548A6NM66 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
LINC01548A6NM66 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01548A6NM66 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC15.23■□□□□ 0.03
LINC01548A6NM66 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01548A6NM66 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01548A6NM66 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01548A6NM66 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01548A6NM66 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC15.23■□□□□ 0.03
LINC01548A6NM66 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.23■□□□□ 0.03
LINC01548A6NM66 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.23■□□□□ 0.03
LINC01548A6NM66 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LINC01548A6NM66 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01548A6NM66 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01548A6NM66 B3GAT3P1-201ENST00000471720 806 ntBASIC15.23■□□□□ 0.03
LINC01548A6NM66 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.23■□□□□ 0.03
LINC01548A6NM66 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC15.23■□□□□ 0.03
LINC01548A6NM66 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
LINC01548A6NM66 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01548A6NM66 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.23■□□□□ 0.03
LINC01548A6NM66 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.23■□□□□ 0.03
LINC01548A6NM66 MIR6786-201ENST00000616843 113 ntBASIC15.23■□□□□ 0.03
LINC01548A6NM66 AC130371.2-201ENST00000619443 611 ntBASIC15.23■□□□□ 0.03
LINC01548A6NM66 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.23■□□□□ 0.03
LINC01548A6NM66 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.23■□□□□ 0.03
LINC01548A6NM66 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC15.23■□□□□ 0.03
LINC01548A6NM66 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC15.23■□□□□ 0.03
LINC01548A6NM66 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC15.23■□□□□ 0.03
LINC01548A6NM66 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01548A6NM66 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01548A6NM66 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
LINC01548A6NM66 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.23■□□□□ 0.03
LINC01548A6NM66 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01548A6NM66 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01548A6NM66 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01548A6NM66 RCC2P6-201ENST00000526625 1557 ntBASIC15.23■□□□□ 0.03
LINC01548A6NM66 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC15.23■□□□□ 0.03
LINC01548A6NM66 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
LINC01548A6NM66 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC15.23■□□□□ 0.03
LINC01548A6NM66 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC01548A6NM66 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
LINC01548A6NM66 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
LINC01548A6NM66 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC15.22■□□□□ 0.03
LINC01548A6NM66 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01548A6NM66 AC093484.2-201ENST00000580996 2166 ntBASIC15.22■□□□□ 0.03
LINC01548A6NM66 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC01548A6NM66 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
LINC01548A6NM66 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms