Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RCCD1A6NED2 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.54■□□□□ 0.88
RCCD1A6NED2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.54■□□□□ 0.88
RCCD1A6NED2 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RCCD1A6NED2 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
RCCD1A6NED2 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
RCCD1A6NED2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.54■□□□□ 0.88
RCCD1A6NED2 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
RCCD1A6NED2 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RCCD1A6NED2 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RCCD1A6NED2 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.53■□□□□ 0.88
RCCD1A6NED2 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RCCD1A6NED2 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RCCD1A6NED2 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RCCD1A6NED2 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.53■□□□□ 0.88
RCCD1A6NED2 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.53■□□□□ 0.88
RCCD1A6NED2 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.53■□□□□ 0.88
RCCD1A6NED2 RPS2P52-201ENST00000469610 820 ntBASIC20.53■□□□□ 0.88
RCCD1A6NED2 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RCCD1A6NED2 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.53■□□□□ 0.88
RCCD1A6NED2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RCCD1A6NED2 AC073111.5-205ENST00000641717 521 ntBASIC20.53■□□□□ 0.88
RCCD1A6NED2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
RCCD1A6NED2 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.53■□□□□ 0.88
RCCD1A6NED2 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
RCCD1A6NED2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
RCCD1A6NED2 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RCCD1A6NED2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RCCD1A6NED2 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RCCD1A6NED2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RCCD1A6NED2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RCCD1A6NED2 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RCCD1A6NED2 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RCCD1A6NED2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RCCD1A6NED2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RCCD1A6NED2 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RCCD1A6NED2 BICD1-207ENST00000551848 1962 ntBASIC20.52■□□□□ 0.88
RCCD1A6NED2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RCCD1A6NED2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RCCD1A6NED2 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.52■□□□□ 0.88
RCCD1A6NED2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
RCCD1A6NED2 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
RCCD1A6NED2 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.52■□□□□ 0.88
RCCD1A6NED2 CDCA4P2-201ENST00000441182 718 ntBASIC20.52■□□□□ 0.88
RCCD1A6NED2 AF201337.1-201ENST00000520239 748 ntBASIC20.52■□□□□ 0.88
RCCD1A6NED2 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.52■□□□□ 0.88
RCCD1A6NED2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RCCD1A6NED2 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RCCD1A6NED2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
RCCD1A6NED2 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
RCCD1A6NED2 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.52■□□□□ 0.88
RCCD1A6NED2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RCCD1A6NED2 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RCCD1A6NED2 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RCCD1A6NED2 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RCCD1A6NED2 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RCCD1A6NED2 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RCCD1A6NED2 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RCCD1A6NED2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.51■□□□□ 0.87
RCCD1A6NED2 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RCCD1A6NED2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RCCD1A6NED2 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.51■□□□□ 0.87
RCCD1A6NED2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RCCD1A6NED2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RCCD1A6NED2 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.51■□□□□ 0.87
RCCD1A6NED2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RCCD1A6NED2 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.51■□□□□ 0.87
RCCD1A6NED2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RCCD1A6NED2 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RCCD1A6NED2 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.51■□□□□ 0.87
RCCD1A6NED2 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.51■□□□□ 0.87
RCCD1A6NED2 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.51■□□□□ 0.87
RCCD1A6NED2 AL390719.1-204ENST00000412397 1219 ntBASIC20.51■□□□□ 0.87
RCCD1A6NED2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
RCCD1A6NED2 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.51■□□□□ 0.87
RCCD1A6NED2 AC080038.1-201ENST00000611274 1154 ntBASIC20.51■□□□□ 0.87
RCCD1A6NED2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.51■□□□□ 0.87
RCCD1A6NED2 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RCCD1A6NED2 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RCCD1A6NED2 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RCCD1A6NED2 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RCCD1A6NED2 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.51■□□□□ 0.87
RCCD1A6NED2 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RCCD1A6NED2 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RCCD1A6NED2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.5■□□□□ 0.87
RCCD1A6NED2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
RCCD1A6NED2 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RCCD1A6NED2 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
RCCD1A6NED2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.5■□□□□ 0.87
RCCD1A6NED2 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.5■□□□□ 0.87
RCCD1A6NED2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RCCD1A6NED2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
RCCD1A6NED2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RCCD1A6NED2 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RCCD1A6NED2 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RCCD1A6NED2 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.5■□□□□ 0.87
RCCD1A6NED2 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RCCD1A6NED2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.5■□□□□ 0.87
RCCD1A6NED2 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RCCD1A6NED2 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms