Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC189A1A4V9 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC189A1A4V9 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC189A1A4V9 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC189A1A4V9 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC189A1A4V9 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC189A1A4V9 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.29■□□□□ 0.68
CCDC189A1A4V9 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC189A1A4V9 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CCDC189A1A4V9 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CCDC189A1A4V9 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC189A1A4V9 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC189A1A4V9 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CCDC189A1A4V9 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC189A1A4V9 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CCDC189A1A4V9 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC189A1A4V9 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC189A1A4V9 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC189A1A4V9 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC189A1A4V9 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC189A1A4V9 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
CCDC189A1A4V9 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC189A1A4V9 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC189A1A4V9 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC189A1A4V9 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC189A1A4V9 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC189A1A4V9 AC092118.2-201ENST00000613495 667 ntBASIC19.29■□□□□ 0.68
CCDC189A1A4V9 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CCDC189A1A4V9 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
CCDC189A1A4V9 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC189A1A4V9 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CCDC189A1A4V9 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC189A1A4V9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC189A1A4V9 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC189A1A4V9 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC189A1A4V9 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC189A1A4V9 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC189A1A4V9 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC189A1A4V9 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC189A1A4V9 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CCDC189A1A4V9 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC189A1A4V9 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC189A1A4V9 TFP1-202ENST00000475455 1573 ntBASIC19.28■□□□□ 0.68
CCDC189A1A4V9 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC189A1A4V9 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC189A1A4V9 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC189A1A4V9 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC189A1A4V9 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC189A1A4V9 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC189A1A4V9 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC189A1A4V9 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC189A1A4V9 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CCDC189A1A4V9 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC189A1A4V9 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC189A1A4V9 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC189A1A4V9 AL121832.2-201ENST00000610979 668 ntBASIC19.28■□□□□ 0.68
CCDC189A1A4V9 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC189A1A4V9 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC189A1A4V9 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CCDC189A1A4V9 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC189A1A4V9 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC189A1A4V9 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC189A1A4V9 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC189A1A4V9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
CCDC189A1A4V9 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC189A1A4V9 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC189A1A4V9 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC189A1A4V9 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC189A1A4V9 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
CCDC189A1A4V9 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CCDC189A1A4V9 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC189A1A4V9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC189A1A4V9 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CCDC189A1A4V9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC189A1A4V9 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC189A1A4V9 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC189A1A4V9 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC189A1A4V9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC189A1A4V9 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC189A1A4V9 MIR663A-201ENST00000385250 93 ntBASIC19.27■□□□□ 0.68
CCDC189A1A4V9 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC189A1A4V9 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC189A1A4V9 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC189A1A4V9 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC189A1A4V9 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC189A1A4V9 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC189A1A4V9 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC189A1A4V9 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC189A1A4V9 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC189A1A4V9 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.27■□□□□ 0.67
CCDC189A1A4V9 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
CCDC189A1A4V9 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC189A1A4V9 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC189A1A4V9 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC189A1A4V9 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC189A1A4V9 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC189A1A4V9 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC189A1A4V9 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC189A1A4V9 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC189A1A4V9 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms