Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 SPECC1L-204ENST00000437398 6674 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 SMG6-202ENST00000354901 3473 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 DLG1-201ENST00000346964 5034 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 MAPK10-333ENST00000641607 2481 ntBASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 CERS3-201ENST00000284382 3894 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 POU6F2-201ENST00000403058 2335 ntTSL 5 BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 AC003958.2-202ENST00000432258 3890 ntTSL 2 BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 RAD17-219ENST00000521422 2323 ntTSL 5 BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 MYO18A-214ENST00000533112 7522 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 TCF4-202ENST00000356073 8317 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 NEK6-204ENST00000373603 3447 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 CNTN4-203ENST00000418658 5093 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 ZNF195-203ENST00000343338 3145 ntAPPRIS ALT2 TSL 4 BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 EIF4ENIF1-201ENST00000330125 3544 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 LINC00654-201ENST00000379053 6113 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 MSH6-201ENST00000234420 7476 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 UBE3B-207ENST00000537063 3600 ntTSL 3 BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 IQGAP1-214ENST00000560738 3602 ntTSL 5 BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 ITGB6-211ENST00000620391 4401 ntTSL 3 BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 PAK6-201ENST00000260404 3865 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 AP1G1-202ENST00000393512 3593 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 SNORA71C-201ENST00000364642 134 ntBASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 SNORA14A-201ENST00000364773 135 ntBASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 HIST1H4H-201ENST00000377727 397 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 RNU6-140P-201ENST00000384566 108 ntBASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 AC069281.1-201ENST00000392471 570 ntTSL 4 BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 AL139095.1-201ENST00000404326 391 ntBASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 FRG2FP-203ENST00000422555 567 ntTSL 4 BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 AL606462.1-201ENST00000447187 451 ntBASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 RN7SL150P-201ENST00000462298 262 ntBASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 RN7SL846P-201ENST00000467429 292 ntBASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 AL442663.1-201ENST00000478589 364 ntBASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 RNA5SP444-201ENST00000516844 106 ntBASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 AC008429.3-201ENST00000519755 489 ntTSL 3 BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 OR2AT1P-201ENST00000525935 743 ntBASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 AC084121.2-201ENST00000528788 264 ntBASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 AL589743.2-201ENST00000547821 602 ntBASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 ULK4P3-202ENST00000565158 593 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 RN7SL498P-201ENST00000583650 298 ntBASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 RN7SL616P-201ENST00000584555 269 ntBASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 FKBP1AP1-201ENST00000594588 318 ntBASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 RNU6-86P-201ENST00000606534 107 ntBASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 Xist_exon4.1-201ENST00000615964 126 ntBASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 MIEF1-215ENST00000637854 213 ntBASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 SMG7-216ENST00000638826 219 ntTSL 2 BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 HMGCLL1-201ENST00000274901 2475 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 LDB2-202ENST00000441778 2476 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 C2-201ENST00000299367 2850 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 PLA2G4A-201ENST00000367466 2875 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 KDM4A-201ENST00000372396 4474 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 AC022819.1-201ENST00000563495 3910 ntBASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 PCBP2-206ENST00000455667 2741 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 SCO1-201ENST00000255390 9612 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 CCDC88A-202ENST00000336838 9505 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 AC010624.4-201ENST00000597606 1351 ntBASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 LINC02028-202ENST00000432154 2666 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 DCLRE1B-201ENST00000369563 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 GALNTL6-203ENST00000506823 3922 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 TANGO6-201ENST00000261778 4816 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 ZNF83-211ENST00000597597 4442 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 AK3-204ENST00000611749 4029 ntTSL 4 BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 ZSCAN23-201ENST00000289788 3126 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
KRTAP3-3Q9BYR6 SON-202ENST00000356577 8813 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 FLNB-AS1-202ENST00000488720 3709 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 TPM1-233ENST00000610733 3957 ntTSL 2 BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 CAMSAP2-203ENST00000413307 4498 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 CDH18-202ENST00000382275 3087 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 CLDN18-202ENST00000343735 3434 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 149.4 ms