Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 HSPE1P14-201ENST00000605812 302 ntBASIC7.13□□□□□ -1.27
COL9A1P20849 BX284668.6-201ENST00000606899 438 ntBASIC7.13□□□□□ -1.27
COL9A1P20849 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC7.13□□□□□ -1.27
COL9A1P20849 AC129915.3-201ENST00000634128 948 ntBASIC7.13□□□□□ -1.27
COL9A1P20849 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
COL9A1P20849 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
COL9A1P20849 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL9A1P20849 AC016583.1-201ENST00000624221 2431 ntBASIC7.13□□□□□ -1.27
COL9A1P20849 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC7.13□□□□□ -1.27
COL9A1P20849 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
COL9A1P20849 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.13□□□□□ -1.27
COL9A1P20849 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL9A1P20849 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
COL9A1P20849 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL9A1P20849 ZNF33CP-201ENST00000432492 2030 ntBASIC7.13□□□□□ -1.27
COL9A1P20849 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL9A1P20849 BDNF-213ENST00000525950 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL9A1P20849 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC7.13□□□□□ -1.27
COL9A1P20849 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
COL9A1P20849 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
COL9A1P20849 ZNF806-201ENST00000438300 1774 ntBASIC7.13□□□□□ -1.27
COL9A1P20849 AC006058.1-201ENST00000568686 5067 ntBASIC7.12□□□□□ -1.27
COL9A1P20849 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL9A1P20849 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL9A1P20849 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC7.12□□□□□ -1.27
COL9A1P20849 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL9A1P20849 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC7.12□□□□□ -1.27
COL9A1P20849 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL9A1P20849 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL9A1P20849 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL9A1P20849 RBPJP2-201ENST00000618187 1444 ntBASIC7.12□□□□□ -1.27
COL9A1P20849 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
COL9A1P20849 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL9A1P20849 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL9A1P20849 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC7.12□□□□□ -1.27
COL9A1P20849 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC7.12□□□□□ -1.27
COL9A1P20849 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL9A1P20849 Y_RNA.65-201ENST00000362846 100 ntBASIC7.12□□□□□ -1.27
COL9A1P20849 SNORD50.2-201ENST00000365465 70 ntBASIC7.12□□□□□ -1.27
COL9A1P20849 RNU6-214P-201ENST00000384130 107 ntBASIC7.12□□□□□ -1.27
COL9A1P20849 RNU6-842P-201ENST00000384269 107 ntBASIC7.12□□□□□ -1.27
COL9A1P20849 SNORA51.11-201ENST00000384442 131 ntBASIC7.12□□□□□ -1.27
COL9A1P20849 MRPL35P1-201ENST00000404272 572 ntBASIC7.12□□□□□ -1.27
COL9A1P20849 SPTLC1P2-201ENST00000407089 121 ntBASIC7.12□□□□□ -1.27
COL9A1P20849 RNU6-1156P-201ENST00000410365 100 ntBASIC7.12□□□□□ -1.27
COL9A1P20849 RNU2-25P-201ENST00000411041 191 ntBASIC7.12□□□□□ -1.27
COL9A1P20849 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC7.12□□□□□ -1.27
COL9A1P20849 RHOT1P3-201ENST00000436571 331 ntBASIC7.12□□□□□ -1.27
COL9A1P20849 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.12□□□□□ -1.27
COL9A1P20849 AC097463.1-201ENST00000447288 481 ntBASIC7.12□□□□□ -1.27
COL9A1P20849 BX323845.2-201ENST00000458382 234 ntBASIC7.12□□□□□ -1.27
COL9A1P20849 RPS26P11-201ENST00000463445 348 ntBASIC7.12□□□□□ -1.27
COL9A1P20849 RPS26P6-201ENST00000475156 348 ntBASIC7.12□□□□□ -1.27
COL9A1P20849 RN7SL799P-201ENST00000475891 298 ntBASIC7.12□□□□□ -1.27
COL9A1P20849 AC105384.2-201ENST00000508433 640 ntBASIC7.12□□□□□ -1.27
COL9A1P20849 AC083906.1-201ENST00000509298 406 ntBASIC7.12□□□□□ -1.27
COL9A1P20849 RNU6-397P-201ENST00000516226 104 ntBASIC7.12□□□□□ -1.27
COL9A1P20849 AC109329.1-201ENST00000518744 317 ntBASIC7.12□□□□□ -1.27
COL9A1P20849 RANP3-201ENST00000530970 276 ntBASIC7.12□□□□□ -1.27
COL9A1P20849 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC7.12□□□□□ -1.27
COL9A1P20849 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC7.12□□□□□ -1.27
COL9A1P20849 SNORD95-201ENST00000579879 68 ntBASIC7.12□□□□□ -1.27
COL9A1P20849 AC010900.2-201ENST00000604508 210 ntBASIC7.12□□□□□ -1.27
COL9A1P20849 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL9A1P20849 AC009570.1-201ENST00000609599 745 ntBASIC7.12□□□□□ -1.27
COL9A1P20849 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC7.12□□□□□ -1.27
COL9A1P20849 SNX18P10-201ENST00000625014 519 ntBASIC7.12□□□□□ -1.27
COL9A1P20849 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC7.12□□□□□ -1.27
COL9A1P20849 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL9A1P20849 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL9A1P20849 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.12□□□□□ -1.27
COL9A1P20849 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL9A1P20849 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL9A1P20849 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
COL9A1P20849 AC007342.5-201ENST00000571340 2142 ntBASIC7.12□□□□□ -1.27
COL9A1P20849 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL9A1P20849 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL9A1P20849 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL9A1P20849 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
COL9A1P20849 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL9A1P20849 ZNF72P-201ENST00000425869 1908 ntBASIC7.11□□□□□ -1.27
COL9A1P20849 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL9A1P20849 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC7.11□□□□□ -1.27
COL9A1P20849 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC7.11□□□□□ -1.27
COL9A1P20849 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL9A1P20849 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.11□□□□□ -1.27
COL9A1P20849 AC018688.1-201ENST00000636528 1754 ntBASIC7.11□□□□□ -1.27
COL9A1P20849 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL9A1P20849 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC7.11□□□□□ -1.27
COL9A1P20849 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL9A1P20849 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL9A1P20849 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL9A1P20849 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC7.11□□□□□ -1.27
COL9A1P20849 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC7.11□□□□□ -1.27
COL9A1P20849 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC7.11□□□□□ -1.27
COL9A1P20849 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL9A1P20849 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL9A1P20849 MITF-203ENST00000328528 4680 ntTSL 5 BASIC7.11□□□□□ -1.27
COL9A1P20849 RNU6-1059P-201ENST00000363752 98 ntBASIC7.11□□□□□ -1.27
COL9A1P20849 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms