RNA–Protein interactions for RNA: ENST00000516226.1

RNU6-397P-201, Transcript of RNA, U6 small nuclear 397, pseudogene, humanhuman

BASIC

Gene RNU6-397P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-397P-201ENST00000516226 AEBP2Q6ZN18 517 aaPredicted RBP17.56■□□□□ 0.4
RNU6-397P-201ENST00000516226 CHIC1Q5VXU3 224 aa16.79■□□□□ 0.28
RNU6-397P-201ENST00000516226 SENP3Q9H4L4 574 aaPredicted RBP15.16■□□□□ 0.02
RNU6-397P-201ENST00000516226 PHF23Q9BUL5 403 aaPredicted RBP14.86□□□□□ -0.03
RNU6-397P-201ENST00000516226 FOXD1Q16676 465 aa14□□□□□ -0.17
RNU6-397P-201ENST00000516226 PLPPR3Q6T4P5 718 aa13.47□□□□□ -0.25
RNU6-397P-201ENST00000516226 MSH5O43196 834 aa13.26□□□□□ -0.29
RNU6-397P-201ENST00000516226 PIAS4Q8N2W9 510 aaPredicted RBP13.12□□□□□ -0.31
RNU6-397P-201ENST00000516226 PPP6R1Q9UPN7 881 aa13.01□□□□□ -0.33
RNU6-397P-201ENST00000516226 ADRA2BP18089 450 aa12.98□□□□□ -0.33
RNU6-397P-201ENST00000516226 POTEDQ86YR6 584 aa12.8□□□□□ -0.36
RNU6-397P-201ENST00000516226 SCAF1Q9H7N4 1312 aaKnown RBP12.11□□□□□ -0.47
RNU6-397P-201ENST00000516226 DMRT2Q9Y5R5 561 aa11.98□□□□□ -0.49
RNU6-397P-201ENST00000516226 MAPK8IP2Q13387 824 aaPredicted RBP11.88□□□□□ -0.51
RNU6-397P-201ENST00000516226 PPP4R3CPQ6ZMV5 832 aa11.73□□□□□ -0.53
RNU6-397P-201ENST00000516226 CNKSR2Q8WXI2 1034 aa11.58□□□□□ -0.56
RNU6-397P-201ENST00000516226 HOXD11P31277 338 aaPredicted RBP11.56□□□□□ -0.56
RNU6-397P-201ENST00000516226 RNF216Q9NWF9 866 aaPredicted RBP11.49□□□□□ -0.57
RNU6-397P-201ENST00000516226 DCAF8L1A6NGE4 600 aa11.4□□□□□ -0.58
RNU6-397P-201ENST00000516226 NCBP3Q53F19 620 aaKnown RBP11.4□□□□□ -0.58
RNU6-397P-201ENST00000516226 DNAJC5BQ9UF47 199 aa11.3□□□□□ -0.6
RNU6-397P-201ENST00000516226 CACNB1Q02641 598 aaPredicted RBP11.29□□□□□ -0.6
RNU6-397P-201ENST00000516226 RNF39Q9H2S5 420 aa11.24□□□□□ -0.61
RNU6-397P-201ENST00000516226 C1QBPQ07021 282 aaKnown RBP11.15□□□□□ -0.62
RNU6-397P-201ENST00000516226 NPM3O75607 178 aaKnown RBP11.09□□□□□ -0.63
RNU6-397P-201ENST00000516226 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.98□□□□□ -0.65
RNU6-397P-201ENST00000516226 KCNA4P22459 653 aa10.83□□□□□ -0.68
RNU6-397P-201ENST00000516226 U3KPZ7 1027 aaPredicted RBP10.7□□□□□ -0.7
RNU6-397P-201ENST00000516226 APLP2Q06481 763 aa10.64□□□□□ -0.71
RNU6-397P-201ENST00000516226 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.59□□□□□ -0.71
RNU6-397P-201ENST00000516226 HNRNPUL2Q1KMD3 747 aaKnown RBP10.59□□□□□ -0.71
RNU6-397P-201ENST00000516226 SLC4A2P04920 1241 aa10.56□□□□□ -0.72
RNU6-397P-201ENST00000516226 CAPN15O75808 1086 aa10.55□□□□□ -0.72
RNU6-397P-201ENST00000516226 DSG3P32926 999 aa10.49□□□□□ -0.73
RNU6-397P-201ENST00000516226 SPINK5Q9NQ38 1064 aaPredicted RBP10.49□□□□□ -0.73
RNU6-397P-201ENST00000516226 SAMD1Q6SPF0 538 aaPredicted RBP10.48□□□□□ -0.73
RNU6-397P-201ENST00000516226 ZNF219Q9P2Y4 722 aaPredicted RBP10.48□□□□□ -0.73
RNU6-397P-201ENST00000516226 MYCNP04198 464 aaPredicted RBP10.35□□□□□ -0.75
RNU6-397P-201ENST00000516226 TRHP20396 242 aaPredicted RBP10.35□□□□□ -0.75
RNU6-397P-201ENST00000516226 SLC4A1APQ9BWU0 796 aaKnown RBP10.29□□□□□ -0.76
RNU6-397P-201ENST00000516226 ABCB7O75027 752 aa10.23□□□□□ -0.77
RNU6-397P-201ENST00000516226 FOXD4L1Q9NU39 408 aa10.22□□□□□ -0.77
RNU6-397P-201ENST00000516226 RBM42Q9BTD8 480 aaKnown RBP10.16□□□□□ -0.78
RNU6-397P-201ENST00000516226 POLA2Q14181 598 aa10.08□□□□□ -0.8
RNU6-397P-201ENST00000516226 POTEHQ6S545 545 aa10.07□□□□□ -0.8
RNU6-397P-201ENST00000516226 ZBTB12Q9Y330 459 aaPredicted RBP10.07□□□□□ -0.8
RNU6-397P-201ENST00000516226 ATXN8OSP0DMR3 200 aa9.98□□□□□ -0.81
RNU6-397P-201ENST00000516226 ATF5Q9Y2D1 282 aaPredicted RBP9.93□□□□□ -0.82
RNU6-397P-201ENST00000516226 ZBTB22O15209 634 aa9.91□□□□□ -0.82
RNU6-397P-201ENST00000516226 AKT1S1Q96B36 256 aa9.87□□□□□ -0.83
RNU6-397P-201ENST00000516226 CHRDL2Q6WN34 429 aa9.82□□□□□ -0.84
RNU6-397P-201ENST00000516226 FBLN2P98095 1184 aa9.75□□□□□ -0.85
RNU6-397P-201ENST00000516226 OSCARQ8IYS5 282 aa9.75□□□□□ -0.85
RNU6-397P-201ENST00000516226 SPDYE2BA6NHP3 402 aa9.69□□□□□ -0.86
RNU6-397P-201ENST00000516226 SPDYE6P0CI01 402 aa9.69□□□□□ -0.86
RNU6-397P-201ENST00000516226 SPDYE2Q495Y8 402 aa9.69□□□□□ -0.86
RNU6-397P-201ENST00000516226 REM2Q8IYK8 340 aaPredicted RBP9.69□□□□□ -0.86
RNU6-397P-201ENST00000516226 PITPNM1O00562 1244 aa9.57□□□□□ -0.88
RNU6-397P-201ENST00000516226 PIP4P2Q8N4L2 257 aa9.56□□□□□ -0.88
RNU6-397P-201ENST00000516226 FXR2P51116 673 aaKnown RBP eCLIP9.53□□□□□ -0.88
RNU6-397P-201ENST00000516226 MKRN4PQ13434 485 aaPredicted RBP9.52□□□□□ -0.89
RNU6-397P-201ENST00000516226 SSUH2Q9Y2M2 353 aa9.52□□□□□ -0.89
RNU6-397P-201ENST00000516226 SPDYE1Q8NFV5 336 aaPredicted RBP9.51□□□□□ -0.89
RNU6-397P-201ENST00000516226 ZNF692Q9BU19 519 aaPredicted RBP9.5□□□□□ -0.89
RNU6-397P-201ENST00000516226 CSRNP3Q8WYN3 585 aa9.49□□□□□ -0.89
RNU6-397P-201ENST00000516226 SP7Q8TDD2 431 aaPredicted RBP9.46□□□□□ -0.9
RNU6-397P-201ENST00000516226 HAX1O00165 279 aa9.39□□□□□ -0.91
RNU6-397P-201ENST00000516226 CLEC11AQ9Y240 323 aa9.39□□□□□ -0.91
RNU6-397P-201ENST00000516226 PRKAR2AP13861 404 aaKnown RBP9.34□□□□□ -0.91
RNU6-397P-201ENST00000516226 PABPN1Q86U42 306 aaKnown RBP eCLIP9.34□□□□□ -0.91
RNU6-397P-201ENST00000516226 EHMT2Q96KQ7 1210 aa9.33□□□□□ -0.92
RNU6-397P-201ENST00000516226 PRR29P0C7W0 189 aa9.29□□□□□ -0.92
RNU6-397P-201ENST00000516226 C19orf67A6NJJ6 358 aa9.23□□□□□ -0.93
RNU6-397P-201ENST00000516226 STAG3Q9UJ98 1225 aa9.22□□□□□ -0.93
RNU6-397P-201ENST00000516226 EVX2Q03828 476 aa9.15□□□□□ -0.94
RNU6-397P-201ENST00000516226 CHADLQ6NUI6 762 aa9.15□□□□□ -0.94
RNU6-397P-201ENST00000516226 SPDYE4A6NLX3 237 aa9.14□□□□□ -0.95
RNU6-397P-201ENST00000516226 CLCN6P51797 869 aa9.14□□□□□ -0.95
RNU6-397P-201ENST00000516226 FARP1Q9Y4F1 1045 aaPredicted RBP9.11□□□□□ -0.95
RNU6-397P-201ENST00000516226 GABBR2O75899 941 aa9.06□□□□□ -0.96
RNU6-397P-201ENST00000516226 CD44P16070 742 aaKnown RBP9.06□□□□□ -0.96
RNU6-397P-201ENST00000516226 CREBZFQ9NS37 354 aa9.01□□□□□ -0.97
RNU6-397P-201ENST00000516226 NPM1P06748 294 aaKnown RBP eCLIP8.97□□□□□ -0.97
RNU6-397P-201ENST00000516226 ZNF579Q8NAF0 562 aaKnown RBP8.97□□□□□ -0.97
RNU6-397P-201ENST00000516226 PAK3O75914 559 aaPredicted RBP8.96□□□□□ -0.98
RNU6-397P-201ENST00000516226 PROM2Q8N271 834 aa8.96□□□□□ -0.98
RNU6-397P-201ENST00000516226 ZRANB1Q9UGI0 708 aa8.92□□□□□ -0.98
RNU6-397P-201ENST00000516226 DCBLD2Q96PD2 775 aa8.87□□□□□ -0.99
RNU6-397P-201ENST00000516226 PLEKHG5O94827 1062 aa8.85□□□□□ -0.99
RNU6-397P-201ENST00000516226 MNX1P50219 401 aaPredicted RBP8.85□□□□□ -0.99
RNU6-397P-201ENST00000516226 LHX8Q68G74 356 aa8.85□□□□□ -0.99
RNU6-397P-201ENST00000516226 POTEIP0CG38 1075 aa8.8□□□□□ -1
RNU6-397P-201ENST00000516226 GALR2O43603 387 aaPredicted RBP8.75□□□□□ -1.01
RNU6-397P-201ENST00000516226 ZBTB47Q9UFB7 747 aaPredicted RBP8.74□□□□□ -1.01
RNU6-397P-201ENST00000516226 PHF12Q96QT6 1004 aa8.73□□□□□ -1.01
RNU6-397P-201ENST00000516226 MIER1Q8N108 512 aa8.71□□□□□ -1.02
RNU6-397P-201ENST00000516226 PLCD3Q8N3E9 789 aa8.67□□□□□ -1.02
RNU6-397P-201ENST00000516226 CCDC61Q9Y6R9 512 aa8.67□□□□□ -1.02
RNU6-397P-201ENST00000516226 ASTLQ6HA08 431 aaPredicted RBP8.66□□□□□ -1.02
RNU6-397P-201ENST00000516226 MS4A3Q96HJ5 214 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms