Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC7.15□□□□□ -1.27
COL9A1P20849 XRCC6P4-201ENST00000518193 2067 ntBASIC7.15□□□□□ -1.27
COL9A1P20849 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
COL9A1P20849 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.15□□□□□ -1.27
COL9A1P20849 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
COL9A1P20849 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
COL9A1P20849 AC015871.3-201ENST00000618835 2261 ntBASIC7.15□□□□□ -1.27
COL9A1P20849 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL9A1P20849 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
COL9A1P20849 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL9A1P20849 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL9A1P20849 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL9A1P20849 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
COL9A1P20849 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL9A1P20849 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC7.14□□□□□ -1.27
COL9A1P20849 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
COL9A1P20849 OR51A10P-201ENST00000307165 937 ntBASIC7.14□□□□□ -1.27
COL9A1P20849 AL121886.1-201ENST00000358609 435 ntBASIC7.14□□□□□ -1.27
COL9A1P20849 AL445189.1-201ENST00000405722 338 ntBASIC7.14□□□□□ -1.27
COL9A1P20849 AL138885.1-201ENST00000405921 675 ntBASIC7.14□□□□□ -1.27
COL9A1P20849 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.14□□□□□ -1.27
COL9A1P20849 AC114491.1-201ENST00000416095 246 ntBASIC7.14□□□□□ -1.27
COL9A1P20849 FAR2P4-202ENST00000425399 584 ntBASIC7.14□□□□□ -1.27
COL9A1P20849 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
COL9A1P20849 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC7.14□□□□□ -1.27
COL9A1P20849 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC7.14□□□□□ -1.27
COL9A1P20849 OR3D1P-201ENST00000438288 955 ntBASIC7.14□□□□□ -1.27
COL9A1P20849 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC7.14□□□□□ -1.27
COL9A1P20849 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC7.14□□□□□ -1.27
COL9A1P20849 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC7.14□□□□□ -1.27
COL9A1P20849 PSPC1P2-201ENST00000455130 225 ntBASIC7.14□□□□□ -1.27
COL9A1P20849 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC7.14□□□□□ -1.27
COL9A1P20849 LINC01399-202ENST00000458450 244 ntBASIC7.14□□□□□ -1.27
COL9A1P20849 AC093270.2-201ENST00000486157 792 ntBASIC7.14□□□□□ -1.27
COL9A1P20849 AL136038.1-201ENST00000497246 351 ntBASIC7.14□□□□□ -1.27
COL9A1P20849 AC016559.2-201ENST00000510759 359 ntBASIC7.14□□□□□ -1.27
COL9A1P20849 AC093664.1-201ENST00000511779 289 ntBASIC7.14□□□□□ -1.27
COL9A1P20849 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC7.14□□□□□ -1.27
COL9A1P20849 RN7SKP96-201ENST00000516948 297 ntBASIC7.14□□□□□ -1.27
COL9A1P20849 RNU7-4P-201ENST00000516961 62 ntBASIC7.14□□□□□ -1.27
COL9A1P20849 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC7.14□□□□□ -1.27
COL9A1P20849 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC7.14□□□□□ -1.27
COL9A1P20849 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC7.14□□□□□ -1.27
COL9A1P20849 CLMN-206ENST00000556441 452 ntTSL 5 BASIC7.14□□□□□ -1.27
COL9A1P20849 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC7.14□□□□□ -1.27
COL9A1P20849 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL9A1P20849 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL9A1P20849 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL9A1P20849 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC7.14□□□□□ -1.27
COL9A1P20849 CR382285.1-202ENST00000604687 547 ntBASIC7.14□□□□□ -1.27
COL9A1P20849 uc_338.9-201ENST00000617424 182 ntBASIC7.14□□□□□ -1.27
COL9A1P20849 AL159153.1-201ENST00000619688 317 ntBASIC7.14□□□□□ -1.27
COL9A1P20849 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
COL9A1P20849 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL9A1P20849 TTC3P1-201ENST00000399586 6081 ntBASIC7.14□□□□□ -1.27
COL9A1P20849 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL9A1P20849 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
COL9A1P20849 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL9A1P20849 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL9A1P20849 AC011008.2-201ENST00000624866 3352 ntBASIC7.14□□□□□ -1.27
COL9A1P20849 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC7.14□□□□□ -1.27
COL9A1P20849 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC7.14□□□□□ -1.27
COL9A1P20849 AL445437.1-201ENST00000623157 3087 ntBASIC7.14□□□□□ -1.27
COL9A1P20849 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
COL9A1P20849 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC7.14□□□□□ -1.27
COL9A1P20849 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC7.14□□□□□ -1.27
COL9A1P20849 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.14□□□□□ -1.27
COL9A1P20849 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
COL9A1P20849 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.13□□□□□ -1.27
COL9A1P20849 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC7.13□□□□□ -1.27
COL9A1P20849 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC7.13□□□□□ -1.27
COL9A1P20849 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL9A1P20849 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL9A1P20849 TRIM51GP-201ENST00000534741 1350 ntBASIC7.13□□□□□ -1.27
COL9A1P20849 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC7.13□□□□□ -1.27
COL9A1P20849 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
COL9A1P20849 RNU6-704P-201ENST00000364162 103 ntBASIC7.13□□□□□ -1.27
COL9A1P20849 RNU5E-6P-201ENST00000365574 115 ntBASIC7.13□□□□□ -1.27
COL9A1P20849 PRRC2CP1-201ENST00000404428 159 ntBASIC7.13□□□□□ -1.27
COL9A1P20849 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC7.13□□□□□ -1.27
COL9A1P20849 AC007365.2-201ENST00000428806 458 ntBASIC7.13□□□□□ -1.27
COL9A1P20849 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC7.13□□□□□ -1.27
COL9A1P20849 RPSAP65-201ENST00000429660 595 ntBASIC7.13□□□□□ -1.27
COL9A1P20849 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL9A1P20849 RPL37P1-201ENST00000432310 284 ntBASIC7.13□□□□□ -1.27
COL9A1P20849 RPL7AP71-201ENST00000451120 739 ntBASIC7.13□□□□□ -1.27
COL9A1P20849 HLA-DPA3-207ENST00000454398 229 ntBASIC7.13□□□□□ -1.27
COL9A1P20849 RNU7-120P-201ENST00000459334 63 ntBASIC7.13□□□□□ -1.27
COL9A1P20849 RN7SL39P-201ENST00000462264 297 ntBASIC7.13□□□□□ -1.27
COL9A1P20849 RPS29P26-201ENST00000477483 171 ntBASIC7.13□□□□□ -1.27
COL9A1P20849 RNU6-323P-201ENST00000521915 107 ntBASIC7.13□□□□□ -1.27
COL9A1P20849 AC005519.1-201ENST00000554490 601 ntBASIC7.13□□□□□ -1.27
COL9A1P20849 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC7.13□□□□□ -1.27
COL9A1P20849 AC025884.1-201ENST00000556034 378 ntBASIC7.13□□□□□ -1.27
COL9A1P20849 CYCSP38-201ENST00000559840 322 ntBASIC7.13□□□□□ -1.27
COL9A1P20849 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC7.13□□□□□ -1.27
COL9A1P20849 AC006600.1-201ENST00000572529 153 ntBASIC7.13□□□□□ -1.27
COL9A1P20849 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
COL9A1P20849 VN1R91P-201ENST00000594377 169 ntBASIC7.13□□□□□ -1.27
COL9A1P20849 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms