RNA–Protein interactions for RNA: ENST00000404428.1

PRRC2CP1-201, Transcript of proline rich coiled-coil 2C pseudogene 1, humanhuman

BASIC

Gene PRRC2CP1, Length 159 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRC2CP1-201ENST00000404428 AEBP2Q6ZN18 517 aaPredicted RBP18.13■□□□□ 0.49
PRRC2CP1-201ENST00000404428 CHIC1Q5VXU3 224 aa16.87■□□□□ 0.29
PRRC2CP1-201ENST00000404428 POTEDQ86YR6 584 aa15.71■□□□□ 0.11
PRRC2CP1-201ENST00000404428 SENP3Q9H4L4 574 aaPredicted RBP15.61■□□□□ 0.09
PRRC2CP1-201ENST00000404428 PHF23Q9BUL5 403 aaPredicted RBP15.25■□□□□ 0.03
PRRC2CP1-201ENST00000404428 FOXD1Q16676 465 aa14.7□□□□□ -0.06
PRRC2CP1-201ENST00000404428 MSH5O43196 834 aa14.17□□□□□ -0.14
PRRC2CP1-201ENST00000404428 PIAS4Q8N2W9 510 aaPredicted RBP13.41□□□□□ -0.26
PRRC2CP1-201ENST00000404428 PPP6R1Q9UPN7 881 aa12.9□□□□□ -0.34
PRRC2CP1-201ENST00000404428 CACNB1Q02641 598 aaPredicted RBP12.78□□□□□ -0.36
PRRC2CP1-201ENST00000404428 ADRA2BP18089 450 aa12.75□□□□□ -0.37
PRRC2CP1-201ENST00000404428 PLPPR3Q6T4P5 718 aa12.48□□□□□ -0.41
PRRC2CP1-201ENST00000404428 DMRT2Q9Y5R5 561 aa12.23□□□□□ -0.45
PRRC2CP1-201ENST00000404428 POTEHQ6S545 545 aa12.08□□□□□ -0.48
PRRC2CP1-201ENST00000404428 MAPK8IP2Q13387 824 aaPredicted RBP12.05□□□□□ -0.48
PRRC2CP1-201ENST00000404428 RNF39Q9H2S5 420 aa12.01□□□□□ -0.49
PRRC2CP1-201ENST00000404428 C1QBPQ07021 282 aaKnown RBP11.76□□□□□ -0.53
PRRC2CP1-201ENST00000404428 SCAF1Q9H7N4 1312 aaKnown RBP11.66□□□□□ -0.54
PRRC2CP1-201ENST00000404428 DCAF8L1A6NGE4 600 aa11.64□□□□□ -0.55
PRRC2CP1-201ENST00000404428 EHMT2Q96KQ7 1210 aa11.62□□□□□ -0.55
PRRC2CP1-201ENST00000404428 KCNA4P22459 653 aa11.57□□□□□ -0.56
PRRC2CP1-201ENST00000404428 HOXD11P31277 338 aaPredicted RBP11.38□□□□□ -0.59
PRRC2CP1-201ENST00000404428 DNAJC5BQ9UF47 199 aa11.25□□□□□ -0.61
PRRC2CP1-201ENST00000404428 SLC4A1APQ9BWU0 796 aaKnown RBP11.16□□□□□ -0.62
PRRC2CP1-201ENST00000404428 CSRNP3Q8WYN3 585 aa11.13□□□□□ -0.63
PRRC2CP1-201ENST00000404428 PPP4R3CPQ6ZMV5 832 aa11.07□□□□□ -0.64
PRRC2CP1-201ENST00000404428 NCBP3Q53F19 620 aaKnown RBP11.01□□□□□ -0.65
PRRC2CP1-201ENST00000404428 RNF216Q9NWF9 866 aaPredicted RBP10.96□□□□□ -0.65
PRRC2CP1-201ENST00000404428 DSG3P32926 999 aa10.86□□□□□ -0.67
PRRC2CP1-201ENST00000404428 NPM3O75607 178 aaKnown RBP10.81□□□□□ -0.68
PRRC2CP1-201ENST00000404428 SP7Q8TDD2 431 aaPredicted RBP10.81□□□□□ -0.68
PRRC2CP1-201ENST00000404428 CNKSR2Q8WXI2 1034 aa10.76□□□□□ -0.69
PRRC2CP1-201ENST00000404428 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.72□□□□□ -0.69
PRRC2CP1-201ENST00000404428 ZBTB22O15209 634 aa10.64□□□□□ -0.71
PRRC2CP1-201ENST00000404428 SPINK5Q9NQ38 1064 aaPredicted RBP10.6□□□□□ -0.71
PRRC2CP1-201ENST00000404428 CAPN15O75808 1086 aa10.58□□□□□ -0.72
PRRC2CP1-201ENST00000404428 CHRDL2Q6WN34 429 aa10.58□□□□□ -0.72
PRRC2CP1-201ENST00000404428 FOXD4L1Q9NU39 408 aa10.47□□□□□ -0.73
PRRC2CP1-201ENST00000404428 SLC24A1O60721 1099 aa10.45□□□□□ -0.74
PRRC2CP1-201ENST00000404428 U3KPZ7 1027 aaPredicted RBP10.45□□□□□ -0.74
PRRC2CP1-201ENST00000404428 RBM42Q9BTD8 480 aaKnown RBP10.37□□□□□ -0.75
PRRC2CP1-201ENST00000404428 AMER1Q5JTC6 1135 aaPredicted RBP10.35□□□□□ -0.75
PRRC2CP1-201ENST00000404428 RTN4Q9NQC3 1192 aaKnown RBP10.33□□□□□ -0.76
PRRC2CP1-201ENST00000404428 PLSCR2Q9NRY7 297 aa10.32□□□□□ -0.76
PRRC2CP1-201ENST00000404428 ABCB7O75027 752 aa10.25□□□□□ -0.77
PRRC2CP1-201ENST00000404428 HAX1O00165 279 aa10.16□□□□□ -0.78
PRRC2CP1-201ENST00000404428 TRHP20396 242 aaPredicted RBP10.14□□□□□ -0.79
PRRC2CP1-201ENST00000404428 ZNF219Q9P2Y4 722 aaPredicted RBP10.13□□□□□ -0.79
PRRC2CP1-201ENST00000404428 LHX8Q68G74 356 aa10.11□□□□□ -0.79
PRRC2CP1-201ENST00000404428 PIP4P2Q8N4L2 257 aa10.1□□□□□ -0.79
PRRC2CP1-201ENST00000404428 ATXN8OSP0DMR3 200 aa10.05□□□□□ -0.8
PRRC2CP1-201ENST00000404428 FKBP8Q14318 412 aa10.05□□□□□ -0.8
PRRC2CP1-201ENST00000404428 SLC4A2P04920 1241 aa10.03□□□□□ -0.8
PRRC2CP1-201ENST00000404428 EVX2Q03828 476 aa10.02□□□□□ -0.81
PRRC2CP1-201ENST00000404428 MYCNP04198 464 aaPredicted RBP10□□□□□ -0.81
PRRC2CP1-201ENST00000404428 APLP2Q06481 763 aa9.99□□□□□ -0.81
PRRC2CP1-201ENST00000404428 AKT1S1Q96B36 256 aa9.91□□□□□ -0.82
PRRC2CP1-201ENST00000404428 FXR2P51116 673 aaKnown RBP eCLIP9.9□□□□□ -0.82
PRRC2CP1-201ENST00000404428 REM2Q8IYK8 340 aaPredicted RBP9.81□□□□□ -0.84
PRRC2CP1-201ENST00000404428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.73□□□□□ -0.85
PRRC2CP1-201ENST00000404428 HNRNPUL2Q1KMD3 747 aaKnown RBP9.73□□□□□ -0.85
PRRC2CP1-201ENST00000404428 PITPNM1O00562 1244 aa9.72□□□□□ -0.85
PRRC2CP1-201ENST00000404428 GABBR2O75899 941 aa9.72□□□□□ -0.85
PRRC2CP1-201ENST00000404428 POLA2Q14181 598 aa9.66□□□□□ -0.86
PRRC2CP1-201ENST00000404428 ATF5Q9Y2D1 282 aaPredicted RBP9.64□□□□□ -0.87
PRRC2CP1-201ENST00000404428 SAMD1Q6SPF0 538 aaPredicted RBP9.62□□□□□ -0.87
PRRC2CP1-201ENST00000404428 C19orf67A6NJJ6 358 aa9.61□□□□□ -0.87
PRRC2CP1-201ENST00000404428 POTEMA6NI47 508 aa9.57□□□□□ -0.88
PRRC2CP1-201ENST00000404428 POTEIP0CG38 1075 aa9.54□□□□□ -0.88
PRRC2CP1-201ENST00000404428 FBXO3Q9UK99 471 aa9.54□□□□□ -0.88
PRRC2CP1-201ENST00000404428 PCDH10Q9P2E7 1040 aa9.52□□□□□ -0.89
PRRC2CP1-201ENST00000404428 PLCB2Q00722 1185 aa9.51□□□□□ -0.89
PRRC2CP1-201ENST00000404428 POTEGQ6S5H5 508 aa9.5□□□□□ -0.89
PRRC2CP1-201ENST00000404428 PRKAR2AP13861 404 aaKnown RBP9.43□□□□□ -0.9
PRRC2CP1-201ENST00000404428 SPDYE4A6NLX3 237 aa9.41□□□□□ -0.9
PRRC2CP1-201ENST00000404428 HAP1P54257 671 aaPredicted RBP9.39□□□□□ -0.91
PRRC2CP1-201ENST00000404428 OSCARQ8IYS5 282 aa9.38□□□□□ -0.91
PRRC2CP1-201ENST00000404428 OTUD5Q96G74 571 aa9.38□□□□□ -0.91
PRRC2CP1-201ENST00000404428 ZBTB12Q9Y330 459 aaPredicted RBP9.38□□□□□ -0.91
PRRC2CP1-201ENST00000404428 VASPP50552 380 aaPredicted RBP9.37□□□□□ -0.91
PRRC2CP1-201ENST00000404428 DCAF8L2P0C7V8 631 aa9.36□□□□□ -0.91
PRRC2CP1-201ENST00000404428 BCANQ96GW7 911 aa9.34□□□□□ -0.91
PRRC2CP1-201ENST00000404428 PROM2Q8N271 834 aa9.33□□□□□ -0.92
PRRC2CP1-201ENST00000404428 MKRN4PQ13434 485 aaPredicted RBP9.26□□□□□ -0.93
PRRC2CP1-201ENST00000404428 IFNLR1Q8IU57 520 aaPredicted RBP9.26□□□□□ -0.93
PRRC2CP1-201ENST00000404428 VSIG10Q8N0Z9 540 aa9.26□□□□□ -0.93
PRRC2CP1-201ENST00000404428 FBLN2P98095 1184 aa9.25□□□□□ -0.93
PRRC2CP1-201ENST00000404428 CLCN6P51797 869 aa9.22□□□□□ -0.93
PRRC2CP1-201ENST00000404428 PKD2Q13563 968 aa9.22□□□□□ -0.93
PRRC2CP1-201ENST00000404428 PRKCSHP14314 528 aaPredicted RBP9.2□□□□□ -0.94
PRRC2CP1-201ENST00000404428 TAOK2Q9UL54 1235 aa9.2□□□□□ -0.94
PRRC2CP1-201ENST00000404428 POTEB2H3BUK9 544 aa9.19□□□□□ -0.94
PRRC2CP1-201ENST00000404428 DCBLD2Q96PD2 775 aa9.17□□□□□ -0.94
PRRC2CP1-201ENST00000404428 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.16□□□□□ -0.94
PRRC2CP1-201ENST00000404428 LCE2DQ5TA82 110 aaPredicted RBP9.12□□□□□ -0.95
PRRC2CP1-201ENST00000404428 BBXQ8WY36 941 aaPredicted RBP9.12□□□□□ -0.95
PRRC2CP1-201ENST00000404428 SPDYE1Q8NFV5 336 aaPredicted RBP9.11□□□□□ -0.95
PRRC2CP1-201ENST00000404428 CLEC11AQ9Y240 323 aa9.1□□□□□ -0.95
PRRC2CP1-201ENST00000404428 CHADLQ6NUI6 762 aa9.08□□□□□ -0.96
PRRC2CP1-201ENST00000404428 SPOCK2Q92563 424 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms