RNA–Protein interactions for RNA: ENST00000458450.1

LINC01399-202, Transcript of long intergenic non-protein coding RNA 1399, humanhuman

BASIC

Gene LINC01399, Length 244 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01399-202ENST00000458450 AEBP2Q6ZN18 517 aaPredicted RBP17.67■□□□□ 0.42
LINC01399-202ENST00000458450 CHIC1Q5VXU3 224 aa16.75■□□□□ 0.27
LINC01399-202ENST00000458450 SENP3Q9H4L4 574 aaPredicted RBP15.12■□□□□ 0.01
LINC01399-202ENST00000458450 PHF23Q9BUL5 403 aaPredicted RBP14.91□□□□□ -0.02
LINC01399-202ENST00000458450 FOXD1Q16676 465 aa14.08□□□□□ -0.16
LINC01399-202ENST00000458450 PLPPR3Q6T4P5 718 aa13.38□□□□□ -0.27
LINC01399-202ENST00000458450 MSH5O43196 834 aa13.22□□□□□ -0.29
LINC01399-202ENST00000458450 PIAS4Q8N2W9 510 aaPredicted RBP13.17□□□□□ -0.3
LINC01399-202ENST00000458450 PPP6R1Q9UPN7 881 aa13.12□□□□□ -0.31
LINC01399-202ENST00000458450 ADRA2BP18089 450 aa13.09□□□□□ -0.31
LINC01399-202ENST00000458450 POTEDQ86YR6 584 aa12.96□□□□□ -0.33
LINC01399-202ENST00000458450 MAPK8IP2Q13387 824 aaPredicted RBP12.04□□□□□ -0.48
LINC01399-202ENST00000458450 SCAF1Q9H7N4 1312 aaKnown RBP12.03□□□□□ -0.48
LINC01399-202ENST00000458450 DMRT2Q9Y5R5 561 aa11.96□□□□□ -0.49
LINC01399-202ENST00000458450 PPP4R3CPQ6ZMV5 832 aa11.73□□□□□ -0.53
LINC01399-202ENST00000458450 DCAF8L1A6NGE4 600 aa11.54□□□□□ -0.56
LINC01399-202ENST00000458450 CNKSR2Q8WXI2 1034 aa11.52□□□□□ -0.57
LINC01399-202ENST00000458450 HOXD11P31277 338 aaPredicted RBP11.5□□□□□ -0.57
LINC01399-202ENST00000458450 RNF216Q9NWF9 866 aaPredicted RBP11.42□□□□□ -0.58
LINC01399-202ENST00000458450 CACNB1Q02641 598 aaPredicted RBP11.39□□□□□ -0.59
LINC01399-202ENST00000458450 NCBP3Q53F19 620 aaKnown RBP11.29□□□□□ -0.6
LINC01399-202ENST00000458450 RNF39Q9H2S5 420 aa11.25□□□□□ -0.61
LINC01399-202ENST00000458450 C1QBPQ07021 282 aaKnown RBP11.11□□□□□ -0.63
LINC01399-202ENST00000458450 DNAJC5BQ9UF47 199 aa11.11□□□□□ -0.63
LINC01399-202ENST00000458450 NPM3O75607 178 aaKnown RBP11.07□□□□□ -0.64
LINC01399-202ENST00000458450 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.01□□□□□ -0.65
LINC01399-202ENST00000458450 KCNA4P22459 653 aa10.83□□□□□ -0.68
LINC01399-202ENST00000458450 U3KPZ7 1027 aaPredicted RBP10.73□□□□□ -0.69
LINC01399-202ENST00000458450 CAPN15O75808 1086 aa10.61□□□□□ -0.71
LINC01399-202ENST00000458450 SPINK5Q9NQ38 1064 aaPredicted RBP10.59□□□□□ -0.71
LINC01399-202ENST00000458450 SLC4A2P04920 1241 aa10.58□□□□□ -0.72
LINC01399-202ENST00000458450 DSG3P32926 999 aa10.52□□□□□ -0.73
LINC01399-202ENST00000458450 APLP2Q06481 763 aa10.47□□□□□ -0.73
LINC01399-202ENST00000458450 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.45□□□□□ -0.74
LINC01399-202ENST00000458450 HNRNPUL2Q1KMD3 747 aaKnown RBP10.45□□□□□ -0.74
LINC01399-202ENST00000458450 TRHP20396 242 aaPredicted RBP10.43□□□□□ -0.74
LINC01399-202ENST00000458450 ZNF219Q9P2Y4 722 aaPredicted RBP10.39□□□□□ -0.75
LINC01399-202ENST00000458450 SAMD1Q6SPF0 538 aaPredicted RBP10.37□□□□□ -0.75
LINC01399-202ENST00000458450 ABCB7O75027 752 aa10.35□□□□□ -0.75
LINC01399-202ENST00000458450 MYCNP04198 464 aaPredicted RBP10.26□□□□□ -0.77
LINC01399-202ENST00000458450 SLC4A1APQ9BWU0 796 aaKnown RBP10.23□□□□□ -0.77
LINC01399-202ENST00000458450 POTEHQ6S545 545 aa10.16□□□□□ -0.78
LINC01399-202ENST00000458450 POLA2Q14181 598 aa10.13□□□□□ -0.79
LINC01399-202ENST00000458450 FOXD4L1Q9NU39 408 aa10.12□□□□□ -0.79
LINC01399-202ENST00000458450 RBM42Q9BTD8 480 aaKnown RBP10.08□□□□□ -0.8
LINC01399-202ENST00000458450 ATF5Q9Y2D1 282 aaPredicted RBP10□□□□□ -0.81
LINC01399-202ENST00000458450 ZBTB12Q9Y330 459 aaPredicted RBP9.93□□□□□ -0.82
LINC01399-202ENST00000458450 ZBTB22O15209 634 aa9.92□□□□□ -0.82
LINC01399-202ENST00000458450 CHRDL2Q6WN34 429 aa9.86□□□□□ -0.83
LINC01399-202ENST00000458450 ATXN8OSP0DMR3 200 aa9.82□□□□□ -0.84
LINC01399-202ENST00000458450 AKT1S1Q96B36 256 aa9.82□□□□□ -0.84
LINC01399-202ENST00000458450 OSCARQ8IYS5 282 aa9.79□□□□□ -0.84
LINC01399-202ENST00000458450 REM2Q8IYK8 340 aaPredicted RBP9.73□□□□□ -0.85
LINC01399-202ENST00000458450 FBLN2P98095 1184 aa9.67□□□□□ -0.86
LINC01399-202ENST00000458450 SPDYE2BA6NHP3 402 aa9.61□□□□□ -0.87
LINC01399-202ENST00000458450 PITPNM1O00562 1244 aa9.61□□□□□ -0.87
LINC01399-202ENST00000458450 SPDYE6P0CI01 402 aa9.61□□□□□ -0.87
LINC01399-202ENST00000458450 SPDYE2Q495Y8 402 aa9.61□□□□□ -0.87
LINC01399-202ENST00000458450 PIP4P2Q8N4L2 257 aa9.61□□□□□ -0.87
LINC01399-202ENST00000458450 MKRN4PQ13434 485 aaPredicted RBP9.54□□□□□ -0.88
LINC01399-202ENST00000458450 FXR2P51116 673 aaKnown RBP eCLIP9.53□□□□□ -0.88
LINC01399-202ENST00000458450 SP7Q8TDD2 431 aaPredicted RBP9.51□□□□□ -0.89
LINC01399-202ENST00000458450 ZNF692Q9BU19 519 aaPredicted RBP9.5□□□□□ -0.89
LINC01399-202ENST00000458450 HAX1O00165 279 aa9.49□□□□□ -0.89
LINC01399-202ENST00000458450 SPDYE1Q8NFV5 336 aaPredicted RBP9.46□□□□□ -0.9
LINC01399-202ENST00000458450 CLEC11AQ9Y240 323 aa9.46□□□□□ -0.9
LINC01399-202ENST00000458450 CSRNP3Q8WYN3 585 aa9.44□□□□□ -0.9
LINC01399-202ENST00000458450 SSUH2Q9Y2M2 353 aa9.44□□□□□ -0.9
LINC01399-202ENST00000458450 PRKAR2AP13861 404 aaKnown RBP9.39□□□□□ -0.91
LINC01399-202ENST00000458450 PABPN1Q86U42 306 aaKnown RBP eCLIP9.35□□□□□ -0.91
LINC01399-202ENST00000458450 EHMT2Q96KQ7 1210 aa9.33□□□□□ -0.92
LINC01399-202ENST00000458450 EVX2Q03828 476 aa9.31□□□□□ -0.92
LINC01399-202ENST00000458450 PRR29P0C7W0 189 aa9.3□□□□□ -0.92
LINC01399-202ENST00000458450 CHADLQ6NUI6 762 aa9.26□□□□□ -0.93
LINC01399-202ENST00000458450 C19orf67A6NJJ6 358 aa9.23□□□□□ -0.93
LINC01399-202ENST00000458450 GABBR2O75899 941 aa9.12□□□□□ -0.95
LINC01399-202ENST00000458450 FARP1Q9Y4F1 1045 aaPredicted RBP9.12□□□□□ -0.95
LINC01399-202ENST00000458450 SPDYE4A6NLX3 237 aa9.1□□□□□ -0.95
LINC01399-202ENST00000458450 STAG3Q9UJ98 1225 aa9.1□□□□□ -0.95
LINC01399-202ENST00000458450 CD44P16070 742 aaKnown RBP9.08□□□□□ -0.96
LINC01399-202ENST00000458450 CREBZFQ9NS37 354 aa9.01□□□□□ -0.97
LINC01399-202ENST00000458450 CLCN6P51797 869 aa8.98□□□□□ -0.97
LINC01399-202ENST00000458450 ZRANB1Q9UGI0 708 aa8.95□□□□□ -0.98
LINC01399-202ENST00000458450 LHX8Q68G74 356 aa8.93□□□□□ -0.98
LINC01399-202ENST00000458450 ZNF579Q8NAF0 562 aaKnown RBP8.92□□□□□ -0.98
LINC01399-202ENST00000458450 DCBLD2Q96PD2 775 aa8.91□□□□□ -0.98
LINC01399-202ENST00000458450 POTEIP0CG38 1075 aa8.9□□□□□ -0.98
LINC01399-202ENST00000458450 PAK3O75914 559 aaPredicted RBP8.89□□□□□ -0.99
LINC01399-202ENST00000458450 NPM1P06748 294 aaKnown RBP eCLIP8.89□□□□□ -0.99
LINC01399-202ENST00000458450 MNX1P50219 401 aaPredicted RBP8.83□□□□□ -1
LINC01399-202ENST00000458450 GALR2O43603 387 aaPredicted RBP8.82□□□□□ -1
LINC01399-202ENST00000458450 PROM2Q8N271 834 aa8.82□□□□□ -1
LINC01399-202ENST00000458450 PHF12Q96QT6 1004 aa8.81□□□□□ -1
LINC01399-202ENST00000458450 PLEKHG5O94827 1062 aa8.73□□□□□ -1.01
LINC01399-202ENST00000458450 MIER1Q8N108 512 aa8.72□□□□□ -1.01
LINC01399-202ENST00000458450 TSPYL2Q9H2G4 693 aaPredicted RBP8.72□□□□□ -1.01
LINC01399-202ENST00000458450 MS4A3Q96HJ5 214 aa8.68□□□□□ -1.02
LINC01399-202ENST00000458450 PELP1Q8IZL8 1130 aaKnown RBP8.65□□□□□ -1.02
LINC01399-202ENST00000458450 PLCD3Q8N3E9 789 aa8.65□□□□□ -1.02
LINC01399-202ENST00000458450 CCDC61Q9Y6R9 512 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms