RNA–Protein interactions for RNA: ENST00000516961.1

RNU7-4P-201, Transcript of RNA, U7 small nuclear 4 pseudogene, humanhuman

BASIC

Gene RNU7-4P, Length 62 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU7-4P-201ENST00000516961 AEBP2Q6ZN18 517 aaPredicted RBP17.13■□□□□ 0.33
RNU7-4P-201ENST00000516961 CHIC1Q5VXU3 224 aa16.37■□□□□ 0.21
RNU7-4P-201ENST00000516961 PHF23Q9BUL5 403 aaPredicted RBP14.44□□□□□ -0.1
RNU7-4P-201ENST00000516961 SENP3Q9H4L4 574 aaPredicted RBP14.44□□□□□ -0.1
RNU7-4P-201ENST00000516961 FOXD1Q16676 465 aa13.51□□□□□ -0.25
RNU7-4P-201ENST00000516961 PLPPR3Q6T4P5 718 aa13.1□□□□□ -0.31
RNU7-4P-201ENST00000516961 PPP6R1Q9UPN7 881 aa12.83□□□□□ -0.36
RNU7-4P-201ENST00000516961 ADRA2BP18089 450 aa12.76□□□□□ -0.37
RNU7-4P-201ENST00000516961 PIAS4Q8N2W9 510 aaPredicted RBP12.61□□□□□ -0.39
RNU7-4P-201ENST00000516961 MSH5O43196 834 aa12.48□□□□□ -0.41
RNU7-4P-201ENST00000516961 POTEDQ86YR6 584 aa11.93□□□□□ -0.5
RNU7-4P-201ENST00000516961 MAPK8IP2Q13387 824 aaPredicted RBP11.68□□□□□ -0.54
RNU7-4P-201ENST00000516961 PPP4R3CPQ6ZMV5 832 aa11.54□□□□□ -0.56
RNU7-4P-201ENST00000516961 DMRT2Q9Y5R5 561 aa11.53□□□□□ -0.56
RNU7-4P-201ENST00000516961 SCAF1Q9H7N4 1312 aaKnown RBP11.53□□□□□ -0.56
RNU7-4P-201ENST00000516961 CNKSR2Q8WXI2 1034 aa11.25□□□□□ -0.61
RNU7-4P-201ENST00000516961 HOXD11P31277 338 aaPredicted RBP11.19□□□□□ -0.62
RNU7-4P-201ENST00000516961 RNF216Q9NWF9 866 aaPredicted RBP11.12□□□□□ -0.63
RNU7-4P-201ENST00000516961 NCBP3Q53F19 620 aaKnown RBP11.07□□□□□ -0.64
RNU7-4P-201ENST00000516961 NPM3O75607 178 aaKnown RBP11.03□□□□□ -0.64
RNU7-4P-201ENST00000516961 KCNA4P22459 653 aa11.01□□□□□ -0.65
RNU7-4P-201ENST00000516961 DCAF8L1A6NGE4 600 aa10.95□□□□□ -0.66
RNU7-4P-201ENST00000516961 DNAJC5BQ9UF47 199 aa10.78□□□□□ -0.68
RNU7-4P-201ENST00000516961 RNF39Q9H2S5 420 aa10.75□□□□□ -0.69
RNU7-4P-201ENST00000516961 CACNB1Q02641 598 aaPredicted RBP10.58□□□□□ -0.72
RNU7-4P-201ENST00000516961 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.58□□□□□ -0.72
RNU7-4P-201ENST00000516961 SLC4A2P04920 1241 aa10.53□□□□□ -0.72
RNU7-4P-201ENST00000516961 C1QBPQ07021 282 aaKnown RBP10.53□□□□□ -0.72
RNU7-4P-201ENST00000516961 U3KPZ7 1027 aaPredicted RBP10.47□□□□□ -0.73
RNU7-4P-201ENST00000516961 SLC4A1APQ9BWU0 796 aaKnown RBP10.36□□□□□ -0.75
RNU7-4P-201ENST00000516961 SPINK5Q9NQ38 1064 aaPredicted RBP10.27□□□□□ -0.77
RNU7-4P-201ENST00000516961 ZBTB22O15209 634 aa10.2□□□□□ -0.78
RNU7-4P-201ENST00000516961 FOXD4L1Q9NU39 408 aa10.15□□□□□ -0.78
RNU7-4P-201ENST00000516961 CAPN15O75808 1086 aa10.14□□□□□ -0.79
RNU7-4P-201ENST00000516961 MYCNP04198 464 aaPredicted RBP10.13□□□□□ -0.79
RNU7-4P-201ENST00000516961 DSG3P32926 999 aa10.12□□□□□ -0.79
RNU7-4P-201ENST00000516961 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.1□□□□□ -0.79
RNU7-4P-201ENST00000516961 HNRNPUL2Q1KMD3 747 aaKnown RBP10.1□□□□□ -0.79
RNU7-4P-201ENST00000516961 SAMD1Q6SPF0 538 aaPredicted RBP10.09□□□□□ -0.79
RNU7-4P-201ENST00000516961 TRHP20396 242 aaPredicted RBP10.04□□□□□ -0.8
RNU7-4P-201ENST00000516961 APLP2Q06481 763 aa10.02□□□□□ -0.81
RNU7-4P-201ENST00000516961 ZNF219Q9P2Y4 722 aaPredicted RBP10.01□□□□□ -0.81
RNU7-4P-201ENST00000516961 ATF5Q9Y2D1 282 aaPredicted RBP10□□□□□ -0.81
RNU7-4P-201ENST00000516961 ABCB7O75027 752 aa9.98□□□□□ -0.81
RNU7-4P-201ENST00000516961 POLA2Q14181 598 aa9.84□□□□□ -0.83
RNU7-4P-201ENST00000516961 CSRNP3Q8WYN3 585 aa9.84□□□□□ -0.83
RNU7-4P-201ENST00000516961 ATXN8OSP0DMR3 200 aa9.81□□□□□ -0.84
RNU7-4P-201ENST00000516961 EHMT2Q96KQ7 1210 aa9.75□□□□□ -0.85
RNU7-4P-201ENST00000516961 ZBTB12Q9Y330 459 aaPredicted RBP9.59□□□□□ -0.87
RNU7-4P-201ENST00000516961 MKRN4PQ13434 485 aaPredicted RBP9.55□□□□□ -0.88
RNU7-4P-201ENST00000516961 OSCARQ8IYS5 282 aa9.55□□□□□ -0.88
RNU7-4P-201ENST00000516961 RBM42Q9BTD8 480 aaKnown RBP9.54□□□□□ -0.88
RNU7-4P-201ENST00000516961 FBLN2P98095 1184 aa9.43□□□□□ -0.9
RNU7-4P-201ENST00000516961 AKT1S1Q96B36 256 aa9.41□□□□□ -0.9
RNU7-4P-201ENST00000516961 POTEHQ6S545 545 aa9.36□□□□□ -0.91
RNU7-4P-201ENST00000516961 REM2Q8IYK8 340 aaPredicted RBP9.36□□□□□ -0.91
RNU7-4P-201ENST00000516961 SPDYE2BA6NHP3 402 aa9.35□□□□□ -0.91
RNU7-4P-201ENST00000516961 SPDYE6P0CI01 402 aa9.35□□□□□ -0.91
RNU7-4P-201ENST00000516961 SPDYE2Q495Y8 402 aa9.35□□□□□ -0.91
RNU7-4P-201ENST00000516961 CHRDL2Q6WN34 429 aa9.33□□□□□ -0.92
RNU7-4P-201ENST00000516961 SSUH2Q9Y2M2 353 aa9.32□□□□□ -0.92
RNU7-4P-201ENST00000516961 PITPNM1O00562 1244 aa9.27□□□□□ -0.93
RNU7-4P-201ENST00000516961 ZNF692Q9BU19 519 aaPredicted RBP9.25□□□□□ -0.93
RNU7-4P-201ENST00000516961 PIP4P2Q8N4L2 257 aa9.18□□□□□ -0.94
RNU7-4P-201ENST00000516961 FXR2P51116 673 aaKnown RBP eCLIP9.15□□□□□ -0.94
RNU7-4P-201ENST00000516961 PABPN1Q86U42 306 aaKnown RBP eCLIP9.15□□□□□ -0.94
RNU7-4P-201ENST00000516961 SPDYE1Q8NFV5 336 aaPredicted RBP9.12□□□□□ -0.95
RNU7-4P-201ENST00000516961 SPDYE4A6NLX3 237 aa9.1□□□□□ -0.95
RNU7-4P-201ENST00000516961 CLEC11AQ9Y240 323 aa9.08□□□□□ -0.96
RNU7-4P-201ENST00000516961 PROM2Q8N271 834 aa9□□□□□ -0.97
RNU7-4P-201ENST00000516961 PRKAR2AP13861 404 aaKnown RBP8.99□□□□□ -0.97
RNU7-4P-201ENST00000516961 PRR29P0C7W0 189 aa8.96□□□□□ -0.98
RNU7-4P-201ENST00000516961 CHADLQ6NUI6 762 aa8.96□□□□□ -0.98
RNU7-4P-201ENST00000516961 EVX2Q03828 476 aa8.92□□□□□ -0.98
RNU7-4P-201ENST00000516961 HAX1O00165 279 aa8.88□□□□□ -0.99
RNU7-4P-201ENST00000516961 CREBZFQ9NS37 354 aa8.88□□□□□ -0.99
RNU7-4P-201ENST00000516961 STAG3Q9UJ98 1225 aa8.87□□□□□ -0.99
RNU7-4P-201ENST00000516961 SP7Q8TDD2 431 aaPredicted RBP8.86□□□□□ -0.99
RNU7-4P-201ENST00000516961 C19orf67A6NJJ6 358 aa8.85□□□□□ -0.99
RNU7-4P-201ENST00000516961 FKBP8Q14318 412 aa8.84□□□□□ -0.99
RNU7-4P-201ENST00000516961 FARP1Q9Y4F1 1045 aaPredicted RBP8.84□□□□□ -0.99
RNU7-4P-201ENST00000516961 MNX1P50219 401 aaPredicted RBP8.8□□□□□ -1
RNU7-4P-201ENST00000516961 CD44P16070 742 aaKnown RBP8.71□□□□□ -1.02
RNU7-4P-201ENST00000516961 GABBR2O75899 941 aa8.66□□□□□ -1.02
RNU7-4P-201ENST00000516961 ZNF579Q8NAF0 562 aaKnown RBP8.62□□□□□ -1.03
RNU7-4P-201ENST00000516961 MIER1Q8N108 512 aa8.61□□□□□ -1.03
RNU7-4P-201ENST00000516961 ZRANB1Q9UGI0 708 aa8.61□□□□□ -1.03
RNU7-4P-201ENST00000516961 NPM1P06748 294 aaKnown RBP eCLIP8.6□□□□□ -1.03
RNU7-4P-201ENST00000516961 PHF12Q96QT6 1004 aa8.57□□□□□ -1.04
RNU7-4P-201ENST00000516961 POTEIP0CG38 1075 aa8.55□□□□□ -1.04
RNU7-4P-201ENST00000516961 RASEFQ8IZ41 740 aa8.55□□□□□ -1.04
RNU7-4P-201ENST00000516961 PLCD3Q8N3E9 789 aa8.55□□□□□ -1.04
RNU7-4P-201ENST00000516961 FBXO3Q9UK99 471 aa8.53□□□□□ -1.04
RNU7-4P-201ENST00000516961 GALR2O43603 387 aaPredicted RBP8.52□□□□□ -1.05
RNU7-4P-201ENST00000516961 NUBP1P53384 320 aa8.52□□□□□ -1.05
RNU7-4P-201ENST00000516961 VASPP50552 380 aaPredicted RBP8.51□□□□□ -1.05
RNU7-4P-201ENST00000516961 CCDC61Q9Y6R9 512 aa8.51□□□□□ -1.05
RNU7-4P-201ENST00000516961 TSPYL2Q9H2G4 693 aaPredicted RBP8.5□□□□□ -1.05
RNU7-4P-201ENST00000516961 PAK3O75914 559 aaPredicted RBP8.49□□□□□ -1.05
RNU7-4P-201ENST00000516961 PLEKHG5O94827 1062 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms