Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 AP006587.1-201ENST00000534129 1502 ntBASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
HLA-DRB4X5D2U9 AC005082.1-201ENST00000413042 2259 ntBASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 TREX2-204ENST00000370212 861 ntTSL 5 BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 PNN-205ENST00000556530 601 ntTSL 2 BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 AC008403.3-201ENST00000598924 454 ntBASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 AC020916.1-201ENST00000587762 1774 ntBASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 TREX1-205ENST00000625293 1783 ntBASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
HLA-DRB4X5D2U9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC14.54□□□□□ -0.08
HLA-DRB4X5D2U9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DRB4X5D2U9 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DRB4X5D2U9 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DRB4X5D2U9 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC14.54□□□□□ -0.08
HLA-DRB4X5D2U9 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC14.54□□□□□ -0.08
HLA-DRB4X5D2U9 KRT17P3-201ENST00000420566 1262 ntBASIC14.54□□□□□ -0.08
HLA-DRB4X5D2U9 YBX1P10-201ENST00000444752 975 ntBASIC14.54□□□□□ -0.08
HLA-DRB4X5D2U9 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC14.54□□□□□ -0.08
HLA-DRB4X5D2U9 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
HLA-DRB4X5D2U9 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.54□□□□□ -0.08
HLA-DRB4X5D2U9 PRKY-204ENST00000533551 1019 ntBASIC14.54□□□□□ -0.08
HLA-DRB4X5D2U9 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DRB4X5D2U9 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DRB4X5D2U9 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DRB4X5D2U9 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC14.54□□□□□ -0.08
HLA-DRB4X5D2U9 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DRB4X5D2U9 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC14.54□□□□□ -0.08
HLA-DRB4X5D2U9 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14.54□□□□□ -0.08
HLA-DRB4X5D2U9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC14.54□□□□□ -0.08
HLA-DRB4X5D2U9 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DRB4X5D2U9 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DRB4X5D2U9 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
HLA-DRB4X5D2U9 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DRB4X5D2U9 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DRB4X5D2U9 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DRB4X5D2U9 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
HLA-DRB4X5D2U9 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DRB4X5D2U9 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
HLA-DRB4X5D2U9 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC14.54□□□□□ -0.08
HLA-DRB4X5D2U9 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
HLA-DRB4X5D2U9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DRB4X5D2U9 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HLA-DRB4X5D2U9 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DRB4X5D2U9 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
HLA-DRB4X5D2U9 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC14.53□□□□□ -0.08
HLA-DRB4X5D2U9 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DRB4X5D2U9 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HLA-DRB4X5D2U9 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HLA-DRB4X5D2U9 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HLA-DRB4X5D2U9 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DRB4X5D2U9 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DRB4X5D2U9 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
HLA-DRB4X5D2U9 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HLA-DRB4X5D2U9 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC14.53□□□□□ -0.08
HLA-DRB4X5D2U9 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DRB4X5D2U9 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DRB4X5D2U9 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DRB4X5D2U9 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DRB4X5D2U9 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.53□□□□□ -0.08
HLA-DRB4X5D2U9 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HLA-DRB4X5D2U9 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms