Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
PCDHGA11Q9Y5H2 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PCDHGA11Q9Y5H2 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA11Q9Y5H2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PCDHGA11Q9Y5H2 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA11Q9Y5H2 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA11Q9Y5H2 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHGA11Q9Y5H2 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA11Q9Y5H2 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHGA11Q9Y5H2 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHGA11Q9Y5H2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.75■□□□□ 0.59
PCDHGA11Q9Y5H2 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA11Q9Y5H2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA11Q9Y5H2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHGA11Q9Y5H2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA11Q9Y5H2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA11Q9Y5H2 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHGA11Q9Y5H2 AL032819.2-201ENST00000624543 2162 ntBASIC18.75■□□□□ 0.59
PCDHGA11Q9Y5H2 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA11Q9Y5H2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA11Q9Y5H2 KRT8P8-201ENST00000434750 1448 ntBASIC18.74■□□□□ 0.59
PCDHGA11Q9Y5H2 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PCDHGA11Q9Y5H2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA11Q9Y5H2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PCDHGA11Q9Y5H2 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA11Q9Y5H2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA11Q9Y5H2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA11Q9Y5H2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PCDHGA11Q9Y5H2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
PCDHGA11Q9Y5H2 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA11Q9Y5H2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA11Q9Y5H2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA11Q9Y5H2 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGA11Q9Y5H2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA11Q9Y5H2 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA11Q9Y5H2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGA11Q9Y5H2 RNA5SP413-201ENST00000516373 109 ntBASIC18.74■□□□□ 0.59
PCDHGA11Q9Y5H2 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDHGA11Q9Y5H2 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA11Q9Y5H2 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHGA11Q9Y5H2 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.74■□□□□ 0.59
PCDHGA11Q9Y5H2 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA11Q9Y5H2 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA11Q9Y5H2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA11Q9Y5H2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA11Q9Y5H2 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGA11Q9Y5H2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHGA11Q9Y5H2 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA11Q9Y5H2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA11Q9Y5H2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA11Q9Y5H2 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGA11Q9Y5H2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA11Q9Y5H2 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA11Q9Y5H2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA11Q9Y5H2 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA11Q9Y5H2 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA11Q9Y5H2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA11Q9Y5H2 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA11Q9Y5H2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA11Q9Y5H2 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA11Q9Y5H2 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA11Q9Y5H2 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA11Q9Y5H2 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHGA11Q9Y5H2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.73■□□□□ 0.59
PCDHGA11Q9Y5H2 AP003097.1-201ENST00000530657 1135 ntBASIC18.73■□□□□ 0.59
PCDHGA11Q9Y5H2 PRKY-204ENST00000533551 1019 ntBASIC18.73■□□□□ 0.59
PCDHGA11Q9Y5H2 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDHGA11Q9Y5H2 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.73■□□□□ 0.59
PCDHGA11Q9Y5H2 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHGA11Q9Y5H2 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHGA11Q9Y5H2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHGA11Q9Y5H2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA11Q9Y5H2 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA11Q9Y5H2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
PCDHGA11Q9Y5H2 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA11Q9Y5H2 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA11Q9Y5H2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHGA11Q9Y5H2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA11Q9Y5H2 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA11Q9Y5H2 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA11Q9Y5H2 AC093503.3-201ENST00000624917 2352 ntBASIC18.73■□□□□ 0.59
PCDHGA11Q9Y5H2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA11Q9Y5H2 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA11Q9Y5H2 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA11Q9Y5H2 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA11Q9Y5H2 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA11Q9Y5H2 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA11Q9Y5H2 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA11Q9Y5H2 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA11Q9Y5H2 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PCDHGA11Q9Y5H2 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
PCDHGA11Q9Y5H2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHGA11Q9Y5H2 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA11Q9Y5H2 KRT18P16-201ENST00000510337 1294 ntBASIC18.72■□□□□ 0.59
PCDHGA11Q9Y5H2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHGA11Q9Y5H2 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA11Q9Y5H2 AC008403.3-201ENST00000598924 454 ntBASIC18.72■□□□□ 0.59
PCDHGA11Q9Y5H2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHGA11Q9Y5H2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHGA11Q9Y5H2 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms