Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA6Q9Y5G7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGA6Q9Y5G7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PCDHGA6Q9Y5G7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA6Q9Y5G7 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA6Q9Y5G7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA6Q9Y5G7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGA6Q9Y5G7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA6Q9Y5G7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.63■□□□□ 0.57
PCDHGA6Q9Y5G7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA6Q9Y5G7 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PCDHGA6Q9Y5G7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGA6Q9Y5G7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.63■□□□□ 0.57
PCDHGA6Q9Y5G7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.63■□□□□ 0.57
PCDHGA6Q9Y5G7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGA6Q9Y5G7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA6Q9Y5G7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA6Q9Y5G7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA6Q9Y5G7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA6Q9Y5G7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA6Q9Y5G7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA6Q9Y5G7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDHGA6Q9Y5G7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA6Q9Y5G7 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
PCDHGA6Q9Y5G7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDHGA6Q9Y5G7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PCDHGA6Q9Y5G7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PCDHGA6Q9Y5G7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHGA6Q9Y5G7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA6Q9Y5G7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA6Q9Y5G7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA6Q9Y5G7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA6Q9Y5G7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA6Q9Y5G7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA6Q9Y5G7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA6Q9Y5G7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PCDHGA6Q9Y5G7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHGA6Q9Y5G7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDHGA6Q9Y5G7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PCDHGA6Q9Y5G7 AC116562.2-201ENST00000507042 360 ntBASIC18.62■□□□□ 0.57
PCDHGA6Q9Y5G7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.62■□□□□ 0.57
PCDHGA6Q9Y5G7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDHGA6Q9Y5G7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA6Q9Y5G7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA6Q9Y5G7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHGA6Q9Y5G7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA6Q9Y5G7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA6Q9Y5G7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA6Q9Y5G7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDHGA6Q9Y5G7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA6Q9Y5G7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA6Q9Y5G7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDHGA6Q9Y5G7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
PCDHGA6Q9Y5G7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PCDHGA6Q9Y5G7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA6Q9Y5G7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PCDHGA6Q9Y5G7 AP000974.1-201ENST00000623909 2387 ntBASIC18.61■□□□□ 0.57
PCDHGA6Q9Y5G7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PCDHGA6Q9Y5G7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA6Q9Y5G7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA6Q9Y5G7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PCDHGA6Q9Y5G7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDHGA6Q9Y5G7 AC079598.2-202ENST00000546624 1451 ntBASIC18.61■□□□□ 0.57
PCDHGA6Q9Y5G7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA6Q9Y5G7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA6Q9Y5G7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDHGA6Q9Y5G7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA6Q9Y5G7 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.61■□□□□ 0.57
PCDHGA6Q9Y5G7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA6Q9Y5G7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA6Q9Y5G7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA6Q9Y5G7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA6Q9Y5G7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA6Q9Y5G7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHGA6Q9Y5G7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA6Q9Y5G7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHGA6Q9Y5G7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGA6Q9Y5G7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA6Q9Y5G7 KRT16P1-201ENST00000399124 1418 ntBASIC18.6■□□□□ 0.57
PCDHGA6Q9Y5G7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA6Q9Y5G7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PCDHGA6Q9Y5G7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA6Q9Y5G7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA6Q9Y5G7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDHGA6Q9Y5G7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHGA6Q9Y5G7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA6Q9Y5G7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGA6Q9Y5G7 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHGA6Q9Y5G7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHGA6Q9Y5G7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHGA6Q9Y5G7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGA6Q9Y5G7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHGA6Q9Y5G7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA6Q9Y5G7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
PCDHGA6Q9Y5G7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA6Q9Y5G7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA6Q9Y5G7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHGA6Q9Y5G7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA6Q9Y5G7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA6Q9Y5G7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms